RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 RAG1P15918 1043 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 PRKCIP41743 596 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 KCNJ6P48051 423 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 GOLGA8FQ08AF8 430 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 GOLGA8DPQ0D2H9 430 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 GRIK3Q13003 919 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 E4F1Q66K89 784 aaPredicted RBP17.75■□□□□ 0.43
PMF1-206ENST00000606952 GJB7Q6PEY0 223 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 WDR59Q6PJI9 974 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 CPLX3Q8WVH0 158 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 LPPQ93052 612 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 RPS6KC1Q96S38 1066 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 NIF3L1Q9GZT8 377 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 UBE2TQ9NPD8 197 aaPredicted RBP17.75■□□□□ 0.43
PMF1-206ENST00000606952 NLRC4Q9NPP4 1024 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 TUBGCP4Q9UGJ1 667 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 CNTN6Q9UQ52 1028 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 NUB1Q9Y5A7 615 aa17.75■□□□□ 0.43
PMF1-206ENST00000606952 FNDC1Q4ZHG4 1894 aaPredicted RBP17.75■□□□□ 0.43
PMF1-206ENST00000606952 COL4A6Q14031 1691 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 ABHD14A-ACY1A0A1B0GW23 586 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 RBAK-RBAKDNI3L0D1 243 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 EFCAB14O75071 495 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 THP07101 528 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 POLR2BP30876 1174 aaKnown RBP17.74■□□□□ 0.43
PMF1-206ENST00000606952 STAT1P42224 750 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 MFAP3P55082 362 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 SOX4Q06945 474 aaPredicted RBP17.74■□□□□ 0.43
PMF1-206ENST00000606952 CUL2Q13617 745 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 DRAP1Q14919 205 aaPredicted RBP17.74■□□□□ 0.43
PMF1-206ENST00000606952 ZNF699Q32M78 642 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 GLRA4Q5JXX5 417 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 C9orf57Q5W0N0 161 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 SCARA3Q6AZY7 606 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 RRAGAQ7L523 313 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 NPAS4Q8IUM7 802 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 TMEM199Q8N511 208 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 TATDN2Q93075 761 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 ZFP42Q96MM3 310 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 SPAG5Q96R06 1193 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 PI4K2AQ9BTU6 479 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 BCO2Q9BYV7 579 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 MIOSQ9NXC5 875 aa17.74■□□□□ 0.43
PMF1-206ENST00000606952 HOXA2O43364 376 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 PAX3P23760 479 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 SOX5P35711 763 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 PNPLA4P41247 253 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 ASPAP45381 313 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 GUCY2FP51841 1108 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 LRMPQ12912 555 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 CLLU1OSQ5K130 101 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 SFMBT2Q5VUG0 894 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 HGSNATQ68CP4 663 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 GLB1LQ6UWU2 654 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 TMTC1Q8IUR5 882 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 FAM71AQ8IYT1 594 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 RPUSD2Q8IZ73 545 aaKnown RBP17.73■□□□□ 0.43
PMF1-206ENST00000606952 PPM1KQ8N3J5 372 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 KAT5Q92993 513 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 C18orf25Q96B23 403 aaPredicted RBP17.73■□□□□ 0.43
PMF1-206ENST00000606952 ZNF560Q96MR9 790 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 BAG1Q99933 345 aaPredicted RBP17.73■□□□□ 0.43
PMF1-206ENST00000606952 AGAP1Q9UPQ3 857 aa17.73■□□□□ 0.43
PMF1-206ENST00000606952 PTPRSQ13332 1948 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 SSU72P8A0A1W2PR75 194 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 NRDCO43847 1150 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 BAIAP3O94812 1187 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 FERP16591 822 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 ACO1P21399 889 aaKnown RBP17.72■□□□□ 0.43
PMF1-206ENST00000606952 ANXA13P27216 316 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 RPL9P32969 192 aaKnown RBP17.72■□□□□ 0.43
PMF1-206ENST00000606952 SCNN1GP51170 649 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 DSC1Q08554 894 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 MAPK8IP2Q13387 824 aaPredicted RBP17.72■□□□□ 0.43
PMF1-206ENST00000606952 RAPGEF1Q13905 1077 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 IKBKEQ14164 716 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 ZNF667Q5HYK9 610 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 SPOPLQ6IQ16 392 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 LIMS2Q7Z4I7 341 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 IRF2BP2Q7Z5L9 587 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 DEFB128Q7Z7B8 93 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 TRIM44Q96DX7 344 aaPredicted RBP17.72■□□□□ 0.43
PMF1-206ENST00000606952 HPDLQ96IR7 371 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 UROC1Q96N76 676 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 HTATIP2Q9BUP3 242 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 IL23AQ9NPF7 189 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 PRDM5Q9NQX1 630 aaPredicted RBP17.72■□□□□ 0.43
PMF1-206ENST00000606952 GDAP2Q9NXN4 497 aa17.72■□□□□ 0.43
PMF1-206ENST00000606952 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.72■□□□□ 0.43
PMF1-206ENST00000606952 TSC2P49815 1807 aa17.71■□□□□ 0.43
PMF1-206ENST00000606952 FOXN3O00409 490 aaPredicted RBP17.71■□□□□ 0.43
PMF1-206ENST00000606952 ARHGAP6O43182 974 aa17.71■□□□□ 0.43
PMF1-206ENST00000606952 KRT19P08727 400 aa17.71■□□□□ 0.43
PMF1-206ENST00000606952 FAM163BP0C2L3 166 aa17.71■□□□□ 0.43
PMF1-206ENST00000606952 CSF2RAP15509 400 aa17.71■□□□□ 0.43
PMF1-206ENST00000606952 AARSP49588 968 aaKnown RBP eCLIP17.71■□□□□ 0.43
PMF1-206ENST00000606952 AFF1P51825 1210 aaKnown RBP17.71■□□□□ 0.43
PMF1-206ENST00000606952 MYO1EQ12965 1108 aa17.71■□□□□ 0.43
PMF1-206ENST00000606952 PPIGQ13427 754 aaKnown RBP eCLIP17.71■□□□□ 0.434e-7■■■□□ 15.2
PMF1-206ENST00000606952 TUSC3Q13454 348 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms