RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ITGB3P05106 788 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 CTSHP09668 335 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 GZMAP12544 262 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 ATICP31939 592 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 THPOP40225 353 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 GALCP54803 685 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 NAP1L1P55209 391 aaKnown RBP23.13■■□□□ 1.29
USP6NL-204ENST00000606752 FMO1Q01740 532 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 TMEM270Q6UE05 265 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 ZNF677Q86XU0 584 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 DNAAF5Q86Y56 855 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 PALB2Q86YC2 1186 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 ARRDC4Q8NCT1 418 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 ALS2CR12Q96Q35 445 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 ITGA11Q9UKX5 1188 aa23.13■■□□□ 1.29
USP6NL-204ENST00000606752 TMCO5BA8MYB1 307 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 MMEP08473 750 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 TUBB2AQ13885 445 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 ALKAL1Q6UXT8 129 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 UBR7Q8N806 425 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 PCDHB18PQ96TA0 734 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 TUBB2BQ9BVA1 445 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 ISCUQ9H1K1 167 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 DPP3Q9NY33 737 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 TAS2R14Q9NYV8 317 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 ST3GAL5Q9UNP4 418 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 NOD1Q9Y239 953 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 BUB1O43683 1085 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 RECQL4O94761 1208 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 VRTNQ9H8Y1 702 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 TRMT13Q9NUP7 481 aaKnown RBP23.12■■□□□ 1.29
USP6NL-204ENST00000606752 CNTN3Q9P232 1028 aa23.12■■□□□ 1.29
USP6NL-204ENST00000606752 A0A0A6YYK5 440 aaPredicted RBP23.11■■□□□ 1.29
USP6NL-204ENST00000606752 ANO9A1A5B4 782 aa23.11■■□□□ 1.29
USP6NL-204ENST00000606752 TMEM253P0C7T8 217 aa23.11■■□□□ 1.29
USP6NL-204ENST00000606752 GTF2F1P35269 517 aaKnown RBP eCLIP23.11■■□□□ 1.29
USP6NL-204ENST00000606752 RBP5P82980 135 aa23.11■■□□□ 1.29
USP6NL-204ENST00000606752 ZBTB6Q15916 424 aa23.11■■□□□ 1.29
USP6NL-204ENST00000606752 ZNF667Q5HYK9 610 aa23.11■■□□□ 1.29
USP6NL-204ENST00000606752 TWF2Q6IBS0 349 aaKnown RBP23.11■■□□□ 1.29
USP6NL-204ENST00000606752 RBBP8NLQ8NC74 664 aaPredicted RBP23.11■■□□□ 1.29
USP6NL-204ENST00000606752 CHST12Q9NRB3 414 aa23.11■■□□□ 1.29
USP6NL-204ENST00000606752 JRKLQ9Y4A0 524 aa23.11■■□□□ 1.29
USP6NL-204ENST00000606752 MRFAP1Q9Y605 127 aa23.11■■□□□ 1.29
USP6NL-204ENST00000606752 UQCRHLA0A096LP55 91 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 ANKRD62A6NC57 917 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 GPR182O15218 404 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 RTN2O75298 545 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 UQCRHP07919 91 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 AKAP5P24588 427 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 POLR2BP30876 1174 aaKnown RBP23.1■■□□□ 1.29
USP6NL-204ENST00000606752 ASPAP45381 313 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 NFX1Q12986 1120 aaKnown RBP23.1■■□□□ 1.29
USP6NL-204ENST00000606752 WDR72Q3MJ13 1102 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 SH3TC2Q8TF17 1288 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 ZMAT2Q96NC0 199 aaKnown RBP23.1■■□□□ 1.29
USP6NL-204ENST00000606752 TSPAN18Q96SJ8 248 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 APOL6Q9BWW8 343 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.1■■□□□ 1.299e-8■■■■■ 31.3
USP6NL-204ENST00000606752 CISHQ9NSE2 258 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 NXF1Q9UBU9 619 aaKnown RBP23.1■■□□□ 1.29
USP6NL-204ENST00000606752 AGAP1Q9UPQ3 857 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 IPPQ9Y573 584 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 FTLP02792 175 aaPredicted RBP23.1■■□□□ 1.29
USP6NL-204ENST00000606752 YWHAEP62258 255 aaKnown RBP23.1■■□□□ 1.29
USP6NL-204ENST00000606752 IFI16Q16666 785 aaKnown RBP23.1■■□□□ 1.29
USP6NL-204ENST00000606752 CTNNBL1Q8WYA6 563 aaPredicted RBP23.1■■□□□ 1.29
USP6NL-204ENST00000606752 CXCL16Q9H2A7 254 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 PARP2Q9UGN5 583 aa23.1■■□□□ 1.29
USP6NL-204ENST00000606752 A0A1W2PQ45 241 aaPredicted RBP23.09■■□□□ 1.29
USP6NL-204ENST00000606752 A0A1W2PQY0 241 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 ENC1O14682 589 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 SLU7O95391 586 aaKnown RBP23.09■■□□□ 1.29
USP6NL-204ENST00000606752 STAU1O95793 577 aaKnown RBP23.09■■□□□ 1.29
USP6NL-204ENST00000606752 WEE2P0C1S8 567 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 GUCY2FP51841 1108 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 ZNF132P52740 706 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 XKR4Q5GH76 650 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 PAPD7Q5XG87 772 aaKnown RBP23.09■■□□□ 1.29
USP6NL-204ENST00000606752 TMEM130Q8N3G9 435 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 SLC43A3Q8NBI5 491 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 SMG8Q8ND04 991 aaKnown RBP23.09■■□□□ 1.29
USP6NL-204ENST00000606752 HPDLQ96IR7 371 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 BCO2Q9BYV7 579 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 RNF39Q9H2S5 420 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 STARD7Q9NQZ5 370 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 CDC23Q9UJX2 597 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 PCDHGC5Q9Y5F6 944 aa23.09■■□□□ 1.29
USP6NL-204ENST00000606752 ATP1A1P05023 1023 aaKnown RBP23.08■■□□□ 1.29
USP6NL-204ENST00000606752 CD58P19256 250 aa23.08■■□□□ 1.29
USP6NL-204ENST00000606752 GNA15P30679 374 aa23.08■■□□□ 1.29
USP6NL-204ENST00000606752 NOP2P46087 812 aaKnown RBP23.08■■□□□ 1.29
USP6NL-204ENST00000606752 AMPD2Q01433 879 aa23.08■■□□□ 1.29
USP6NL-204ENST00000606752 TRIM71Q2Q1W2 868 aaKnown RBP23.08■■□□□ 1.29
USP6NL-204ENST00000606752 FAM26DQ5JW98 314 aa23.08■■□□□ 1.29
USP6NL-204ENST00000606752 BEST2Q8NFU1 509 aa23.08■■□□□ 1.29
USP6NL-204ENST00000606752 POLIQ9UNA4 740 aa23.08■■□□□ 1.29
USP6NL-204ENST00000606752 PTPN22Q9Y2R2 807 aa23.08■■□□□ 1.29
USP6NL-204ENST00000606752 CITO14578 2027 aa23.08■■□□□ 1.29
USP6NL-204ENST00000606752 CAND2O75155 1236 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms