RNA–Protein interactions for RNA: ENST00000604864.5

NEB-219, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-219ENST00000604864 C2CD6Q53TS8 623 aa3.56□□□□□ -1.84
NEB-219ENST00000604864 NSUN7Q8NE18 718 aaKnown RBP3.56□□□□□ -1.84
NEB-219ENST00000604864 OTUB1Q96FW1 271 aaPredicted RBP3.56□□□□□ -1.84
NEB-219ENST00000604864 QRICH2Q9H0J4 1663 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 PIK3R4Q99570 1358 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 LOC110117498-PIK3R3F6TDL0 507 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 GYS2P54840 703 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 RRP1BQ14684 758 aaKnown RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 SCYL2Q6P3W7 929 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 PIK3R3Q92569 461 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 SNX24Q9Y343 169 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 PHRF1Q9P1Y6 1649 aaKnown RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 SPDYE3A6NKU9 549 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 MPOP05164 745 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 HOXB7P09629 217 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 ASIC1P78348 528 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 CALCRLQ16602 461 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 PTGISQ16647 500 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 TMEM126BQ8IUX1 230 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 REXO1L1PQ8IX06 675 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 BTBD6Q96KE9 485 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 ANKZF1Q9H8Y5 726 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 C12orf4Q9NQ89 552 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 TAGLN3Q9UI15 199 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 F9P00740 461 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 CREMQ03060 361 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 STRIP2Q9ULQ0 834 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 SLC4A4Q9Y6R1 1079 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 COL17A1Q9UMD9 1497 aaPredicted RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 MYO3AQ8NEV4 1616 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 CACNA1FO60840 1977 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 PLEKHG1Q9ULL1 1385 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 ADSSP30520 456 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 GRK3P35626 688 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 MMRN1Q13201 1228 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 MSLNQ13421 630 aaPredicted RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 CARTPTQ16568 116 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 TMCO4Q5TGY1 634 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 SLC35F6Q8N357 371 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 RTL3Q8N8U3 475 aaKnown RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 NUAK2Q9H093 628 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 GPN3Q9UHW5 284 aaPredicted RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 MFAP3LO75121 409 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 ZMYND10O75800 440 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 CLPXO76031 633 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 ATF3P18847 181 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 TXNDC11Q6PKC3 985 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 HACE1Q8IYU2 909 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 PDPRQ8NCN5 879 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 HDAC11Q96DB2 347 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 METTL22Q9BUU2 404 aaPredicted RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 ZNF652Q9Y2D9 606 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 SMNDC1O75940 238 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEB-219ENST00000604864 PIK3CBP42338 1070 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 POU5F1Q01860 360 aaKnown RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 PDIA2Q13087 525 aaKnown RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 C16orf72Q14CZ0 275 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 NLRX1Q86UT6 975 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 RNPC3Q96LT9 517 aaKnown RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 CDRT15Q96T59 188 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 GALNT8Q9NY28 637 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 BFARQ9NZS9 450 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 SUN2Q9UH99 717 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 ABCC12Q96J65 1359 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 H0YJX3 145 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 TPD52L2O43399 206 aaKnown RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 NPTXRO95502 500 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 TMOD1P28289 359 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 CTCFP49711 727 aaPredicted RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 LGALS3BPQ08380 585 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 TTC39BQ5VTQ0 682 aaPredicted RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 DQX1Q8TE96 717 aaKnown RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 DEPDC7Q96QD5 511 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 LSM14BQ9BX40 385 aaKnown RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 LRMDAQ9H2I8 198 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 HMG20AQ9NP66 347 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 USE1Q9NZ43 259 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 PNMA3Q9UL41 463 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 SRGNP10124 158 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 CCNE1P24864 410 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 GUCA1AP43080 201 aaPredicted RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 CHRNB3Q05901 458 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 CERCAMQ5T4B2 595 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 NAIF1Q69YI7 327 aaPredicted RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 BBS5Q8N3I7 341 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 DYDC2Q96IM9 177 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 ACCSQ96QU6 501 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 AP1M1Q9BXS5 423 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 ZNF518BQ9C0D4 1074 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 KLC2Q9H0B6 622 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 AKAP7Q9P0M2 348 aaPredicted RBP3.55□□□□□ -1.84
NEB-219ENST00000604864 G3V2T6 193 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 H7C0C1 242 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 RBP1P09455 135 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 TFEBP19484 476 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 PRCPP42785 496 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 ATP5OP48047 213 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 NAB1Q13506 487 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 PLA2G4FQ68DD2 849 aa3.55□□□□□ -1.84
NEB-219ENST00000604864 CMTR1Q8N1G2 835 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms