RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 MLLT6P55198 1093 aaPredicted RBP12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 EVCP57679 992 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TEAD2Q15562 447 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 MAPK6Q16659 721 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 FAM187BQ17R55 369 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 BMP2KLQ5H9B9 411 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 DGKKQ5KSL6 1271 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 EEF1DP3Q658K8 133 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 MFSD6LQ8IWD5 586 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 FAM177A1Q8N128 213 aaPredicted RBP12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TTC8Q8TAM2 541 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 FAM200AQ8TCP9 573 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 KCNB2Q92953 911 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 LOXL4Q96JB6 756 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 NAP1L4Q99733 375 aaKnown RBP12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 LSM14BQ9BX40 385 aaKnown RBP12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 C8orf33Q9H7E9 229 aaPredicted RBP12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ASAH2Q9NR71 780 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CEP72Q9P209 647 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SPECC1L-ADORA2AF8WAN1 911 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 EXTL3O43909 919 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 RPP40O75818 363 aaKnown RBP12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 BAG4O95429 457 aaKnown RBP12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 EDN1P05305 212 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CTHP32929 405 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 PXNP49023 591 aaPredicted RBP12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TWF1Q12792 350 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 DCAF4L1Q3SXM0 396 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CACNA2D4Q7Z3S7 1137 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 KBTBD6Q86V97 674 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 SHKBP1Q8TBC3 707 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 GAB3Q8WWW8 586 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 BSNDQ8WZ55 320 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ZNF512Q96ME7 567 aaPredicted RBP12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 C2orf40Q9H1Z8 148 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 FBXL5Q9UKA1 691 aa12.95□□□□□ -0.34
PDLIM1P1-201ENST00000604187 MYBPHLA2RUH7 354 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 H7C4K7 107 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ACKR2O00590 384 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CHADO15335 359 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CDC45O75419 566 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CCDC192P0DO97 292 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 HSPA4P34932 840 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 MPLP40238 635 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 RAP1GAPP47736 663 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 NOVA1P51513 510 aaKnown RBP12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 EPHA5P54756 1037 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 SOX4Q06945 474 aaPredicted RBP12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 FCHO2Q0JRZ9 810 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 FOXC1Q12948 553 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CCINQ13939 588 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 PON2Q15165 354 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TPGS2Q68CL5 300 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 RNF43Q68DV7 783 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TCEAL6Q6IPX3 200 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 SKAP1Q86WV1 359 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 RALGPS2Q86X27 583 aaPredicted RBP12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 LEMD2Q8NC56 503 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 MCPH1Q8NEM0 835 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 DEPTORQ8TB45 409 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TCEAL3Q969E4 200 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 E2F7Q96AV8 911 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CCDC113Q9H0I3 377 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 AKAP13Q12802 2813 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 DOCK6Q96HP0 2047 aa12.94□□□□□ -0.34
PDLIM1P1-201ENST00000604187 GCN1Q92616 2671 aaKnown RBP12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 SMIM28A0A1B0GU29 152 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 A0A1W2PRU2 124 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 FAM205CA6NFA0 338 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 PODXLO00592 558 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 SYN3O14994 580 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 SPINK2P20155 84 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TOB2Q14106 344 aaPredicted RBP12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CTXN3Q4LDR2 81 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 EARS2Q5JPH6 523 aaKnown RBP12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CPLX2Q6PUV4 134 aaKnown RBP12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 GPIHBP1Q8IV16 184 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 KDF1Q8NAX2 398 aaPredicted RBP12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ZFYVE19Q96K21 471 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 KIFC3Q9BVG8 833 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 VPS45Q9NRW7 570 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 GJB4Q9NTQ9 266 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 GTSE1Q9NYZ3 720 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 AFF4Q9UHB7 1163 aaKnown RBP12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 PCDHA12Q9UN75 941 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 NUB1Q9Y5A7 615 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 PCDHGA5Q9Y5G8 931 aa12.93□□□□□ -0.34
PDLIM1P1-201ENST00000604187 GIPC1O14908 333 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 FLNBO75369 2602 aaKnown RBP12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 COL4A2P08572 1712 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CPB1P15086 417 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ATP2B1P20020 1258 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 PSMA5P28066 241 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 IRX6P78412 446 aaPredicted RBP12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ZNF252P-AS1Q0IIN9 211 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 STK3Q13188 491 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 MRPL58Q14197 206 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms