RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 C2CD6Q53TS8 623 aa3.56□□□□□ -1.84
NEB-218ENST00000603639 NSUN7Q8NE18 718 aaKnown RBP3.56□□□□□ -1.84
NEB-218ENST00000603639 OTUB1Q96FW1 271 aaPredicted RBP3.56□□□□□ -1.84
NEB-218ENST00000603639 QRICH2Q9H0J4 1663 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 PIK3R4Q99570 1358 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 LOC110117498-PIK3R3F6TDL0 507 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 GYS2P54840 703 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 RRP1BQ14684 758 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 SCYL2Q6P3W7 929 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 PIK3R3Q92569 461 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 SNX24Q9Y343 169 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 PHRF1Q9P1Y6 1649 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 SPDYE3A6NKU9 549 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 MPOP05164 745 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 HOXB7P09629 217 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ASIC1P78348 528 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 CALCRLQ16602 461 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 PTGISQ16647 500 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 TMEM126BQ8IUX1 230 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 REXO1L1PQ8IX06 675 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 BTBD6Q96KE9 485 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ANKZF1Q9H8Y5 726 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 C12orf4Q9NQ89 552 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 TAGLN3Q9UI15 199 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 F9P00740 461 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 CREMQ03060 361 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 STRIP2Q9ULQ0 834 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 SLC4A4Q9Y6R1 1079 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 COL17A1Q9UMD9 1497 aaPredicted RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 MYO3AQ8NEV4 1616 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 CACNA1FO60840 1977 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 PLEKHG1Q9ULL1 1385 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ADSSP30520 456 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 GRK3P35626 688 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 MMRN1Q13201 1228 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 MSLNQ13421 630 aaPredicted RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 CARTPTQ16568 116 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 TMCO4Q5TGY1 634 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 SLC35F6Q8N357 371 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 RTL3Q8N8U3 475 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 NUAK2Q9H093 628 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 GPN3Q9UHW5 284 aaPredicted RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 MFAP3LO75121 409 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ZMYND10O75800 440 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 CLPXO76031 633 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ATF3P18847 181 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 TXNDC11Q6PKC3 985 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 HACE1Q8IYU2 909 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 PDPRQ8NCN5 879 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 HDAC11Q96DB2 347 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 METTL22Q9BUU2 404 aaPredicted RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 ZNF652Q9Y2D9 606 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 SMNDC1O75940 238 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEB-218ENST00000603639 PIK3CBP42338 1070 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 POU5F1Q01860 360 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 PDIA2Q13087 525 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 C16orf72Q14CZ0 275 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 NLRX1Q86UT6 975 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 RNPC3Q96LT9 517 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 CDRT15Q96T59 188 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 GALNT8Q9NY28 637 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 BFARQ9NZS9 450 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 SUN2Q9UH99 717 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ABCC12Q96J65 1359 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 H0YJX3 145 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 TPD52L2O43399 206 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 NPTXRO95502 500 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 TMOD1P28289 359 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 CTCFP49711 727 aaPredicted RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 LGALS3BPQ08380 585 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 TTC39BQ5VTQ0 682 aaPredicted RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 DQX1Q8TE96 717 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 DEPDC7Q96QD5 511 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 LSM14BQ9BX40 385 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 LRMDAQ9H2I8 198 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 HMG20AQ9NP66 347 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 USE1Q9NZ43 259 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 PNMA3Q9UL41 463 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 SRGNP10124 158 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 CCNE1P24864 410 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 GUCA1AP43080 201 aaPredicted RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 CHRNB3Q05901 458 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 CERCAMQ5T4B2 595 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 NAIF1Q69YI7 327 aaPredicted RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 BBS5Q8N3I7 341 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 DYDC2Q96IM9 177 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ACCSQ96QU6 501 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 AP1M1Q9BXS5 423 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ZNF518BQ9C0D4 1074 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 KLC2Q9H0B6 622 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 AKAP7Q9P0M2 348 aaPredicted RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 G3V2T6 193 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 H7C0C1 242 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 RBP1P09455 135 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 TFEBP19484 476 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 PRCPP42785 496 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ATP5OP48047 213 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 NAB1Q13506 487 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 PLA2G4FQ68DD2 849 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 CMTR1Q8N1G2 835 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms