RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 ACTN4O43707 911 aaKnown RBP18.66■□□□□ 0.58
HERC3-214ENST00000601319 ZMYND10O75800 440 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 IL18RAPO95256 599 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 NFICP08651 508 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 WEE2P0C1S8 567 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 PFKFB1P16118 471 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 HOXA9P31269 272 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 MCM4P33991 863 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 TMEM132DQ14C87 1099 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 FAM26FQ5R3K3 315 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 VARS2Q5ST30 1063 aaKnown RBP18.66■□□□□ 0.58
HERC3-214ENST00000601319 SLC8B1Q6J4K2 584 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 NT5DC4Q86YG4 428 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 GLYCTKQ8IVS8 523 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 CEP57L1Q8IYX8 460 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 SYCP3Q8IZU3 236 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 BEST2Q8NFU1 509 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 ZNF707Q96C28 371 aaPredicted RBP18.66■□□□□ 0.58
HERC3-214ENST00000601319 PVALEFA0A1B0GWK0 134 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 KIAA0391O15091 583 aaKnown RBP18.65■□□□□ 0.58
HERC3-214ENST00000601319 ADAM12O43184 909 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 TBC1D4O60343 1298 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 LDHAP00338 332 aaKnown RBP18.65■□□□□ 0.58
HERC3-214ENST00000601319 POU2F2P09086 479 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 HNRNPA1P09651 372 aaKnown RBP eCLIP18.65■□□□□ 0.58
HERC3-214ENST00000601319 MRPL58Q14197 206 aaKnown RBP18.65■□□□□ 0.58
HERC3-214ENST00000601319 LIN9Q5TKA1 542 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 CCDC149Q6ZUS6 474 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 RTL10Q7L3V2 364 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 APPL2Q8NEU8 664 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 FEZF2Q8TBJ5 459 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 CHAMP1Q96JM3 812 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 MUTYHQ9UIF7 546 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 PCDHB8Q9UN66 801 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 CDY1Q9Y6F8 540 aa18.65■□□□□ 0.58
HERC3-214ENST00000601319 CCDC195A0A1B0GUA6 201 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 A0A1W2PQ27 194 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 A0A1W2PQ64 194 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 A0A1W2PQD8 194 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 H7C4K7 107 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 GPR37L1O60883 481 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 RFPL2O75678 378 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 PRPF6O94906 941 aaKnown RBP18.64■□□□□ 0.57
HERC3-214ENST00000601319 MYL1P05976 194 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 SPATA31D3P0C874 917 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 OR1D2P34982 312 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 HOXD13P35453 343 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 RSPO2Q6UXX9 243 aaPredicted RBP18.64■□□□□ 0.57
HERC3-214ENST00000601319 SPATA31D4Q6ZUB0 917 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 BRSK2Q8IWQ3 736 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 ZDHHC14Q8IZN3 488 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 TDRD5Q8NAT2 981 aaKnown RBP18.64■□□□□ 0.57
HERC3-214ENST00000601319 GLIS3Q8NEA6 775 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 ZNF507Q8TCN5 953 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 HPS3Q969F9 1004 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 PRKD2Q9BZL6 878 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 WDR6Q9NNW5 1121 aaKnown RBP18.64■□□□□ 0.57
HERC3-214ENST00000601319 C11orf16Q9NQ32 467 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 DOCK6Q96HP0 2047 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 NOTCH4Q99466 2003 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 MYO10Q9HD67 2058 aa18.64■□□□□ 0.57
HERC3-214ENST00000601319 A0A1B0GVL5 298 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 ANO9A1A5B4 782 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 C2CD4DB7Z1M9 353 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 EXTL3O43909 919 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 NUCB2P80303 420 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 BMT2Q1RMZ1 405 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 C9orf57Q5W0N0 161 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 ZNF280DQ6N043 979 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 ARMCX5Q6P1M9 558 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 SMG7Q92540 1137 aaKnown RBP18.63■□□□□ 0.57
HERC3-214ENST00000601319 FAM212AQ96EL1 285 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 CBWD1Q9BRT8 395 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 FAM213AQ9BRX8 229 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 OXCT2Q9BYC2 517 aaPredicted RBP18.63■□□□□ 0.57
HERC3-214ENST00000601319 TSHZ2Q9NRE2 1034 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 RBAKQ9NYW8 714 aaPredicted RBP18.63■□□□□ 0.57
HERC3-214ENST00000601319 SERTAD1Q9UHV2 236 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 TECTAO75443 2155 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 CLUHO75153 1309 aa18.63■□□□□ 0.57
HERC3-214ENST00000601319 PIRO00625 290 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 OAZ2O95190 189 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 C8AP07357 584 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 AFMP43652 599 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 GUCY2FP51841 1108 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 LILRA4P59901 499 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 SNRPFP62306 86 aaKnown RBP18.62■□□□□ 0.57
HERC3-214ENST00000601319 ROR1Q01973 937 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 CUL4BQ13620 913 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 PTPN21Q16825 1174 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 UVSSAQ2YD98 709 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 TMEM31Q5JXX7 168 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 OTOP3Q7RTS5 596 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 EFCAB13Q8IY85 973 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 PLCD3Q8N3E9 789 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 ZNF461Q8TAF7 563 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 SAAL1Q96ER3 474 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 BLZF1Q9H2G9 400 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 FBXL5Q9UKA1 691 aa18.62■□□□□ 0.57
HERC3-214ENST00000601319 ARHGEF37A1IGU5 675 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms