RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 REPS2Q8NFH8 660 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 MGARPQ8TDB4 240 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 PWWP2AQ96N64 755 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 SCLT1Q96NL6 688 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 NSRP1Q9H0G5 558 aaKnown RBP15.39■□□□□ 0.05
SMG9-211ENST00000601170 APOBEC3GQ9HC16 384 aaKnown RBP15.39■□□□□ 0.05
SMG9-211ENST00000601170 ANAPC5Q9UJX4 755 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 PHIPQ8WWQ0 1821 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 NFASCO94856 1347 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 THAP12O43422 761 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 PSTPIP1O43586 416 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 GNA15P30679 374 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 POLGP54098 1239 aaPredicted RBP15.38■□□□□ 0.05
SMG9-211ENST00000601170 BACE1P56817 501 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 NOMO3P69849 1222 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 CAV1Q03135 178 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 LIN9Q5TKA1 542 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 TMEM270Q6UE05 265 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 CRELD2Q6UXH1 353 aaPredicted RBP15.38■□□□□ 0.05
SMG9-211ENST00000601170 RHOT1Q8IXI2 618 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 FUKQ8N0W3 1084 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.38■□□□□ 0.05
SMG9-211ENST00000601170 DYDC1Q8WWB3 177 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 TMEM143Q96AN5 459 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 HAPLN2Q9GZV7 340 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 ADAM22Q9P0K1 906 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 PCDHB4Q9Y5E5 795 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 TMEM120BA0PK00 339 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 ATP5DP30049 168 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 ABCD1P33897 745 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 GJC1P36383 396 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 CYB5D1Q6P9G0 228 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 VSTM1Q6UX27 236 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.38■□□□□ 0.05
SMG9-211ENST00000601170 ZBTB45Q96K62 511 aaPredicted RBP15.38■□□□□ 0.05
SMG9-211ENST00000601170 RBAKQ9NYW8 714 aaPredicted RBP15.38■□□□□ 0.05
SMG9-211ENST00000601170 NINJ2Q9NZG7 142 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 ZNF214Q9UL59 606 aaPredicted RBP15.38■□□□□ 0.05
SMG9-211ENST00000601170 USTQ9Y2C2 406 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 NEU2Q9Y3R4 380 aa15.38■□□□□ 0.05
SMG9-211ENST00000601170 CD58P19256 250 aa15.37■□□□□ 0.05
SMG9-211ENST00000601170 EN1Q05925 392 aaPredicted RBP15.37■□□□□ 0.05
SMG9-211ENST00000601170 XRCC4Q13426 336 aa15.37■□□□□ 0.05
SMG9-211ENST00000601170 MAMLD1Q13495 774 aa15.37■□□□□ 0.05
SMG9-211ENST00000601170 CCNG2Q16589 344 aa15.37■□□□□ 0.05
SMG9-211ENST00000601170 XKR3Q5GH77 459 aa15.37■□□□□ 0.05
SMG9-211ENST00000601170 ZNF772Q68DY9 489 aaPredicted RBP15.37■□□□□ 0.05
SMG9-211ENST00000601170 ZNF365Q70YC5 407 aa15.37■□□□□ 0.05
SMG9-211ENST00000601170 ABRAQ8N0Z2 381 aa15.37■□□□□ 0.05
SMG9-211ENST00000601170 CDHR1Q96JP9 859 aa15.37■□□□□ 0.05
SMG9-211ENST00000601170 OSBPL8Q9BZF1 889 aa15.37■□□□□ 0.05
SMG9-211ENST00000601170 MRPL47Q9HD33 250 aaKnown RBP15.37■□□□□ 0.05
SMG9-211ENST00000601170 STYXL1Q9Y6J8 313 aa15.37■□□□□ 0.05
SMG9-211ENST00000601170 FOXO6A8MYZ6 492 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 DNAJC8O75937 253 aaPredicted RBP15.36■□□□□ 0.05
SMG9-211ENST00000601170 SUPT20HL2P0C7V6 817 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 SSR1P43307 286 aaKnown RBP15.36■□□□□ 0.05
SMG9-211ENST00000601170 SUPT20HL1Q3ZLR7 823 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 ZBTB41Q5SVQ8 909 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 NBPF12Q5TAG4 269 aaPredicted RBP15.36■□□□□ 0.05
SMG9-211ENST00000601170 MIS18BP1Q6P0N0 1132 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 TRIM72Q6ZMU5 477 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 ANKS1BQ7Z6G8 1248 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 KATNAL2Q8IYT4 538 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 ASAP3Q8TDY4 903 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 CD248Q9HCU0 757 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 ANKFY1Q9P2R3 1169 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 CD2APQ9Y5K6 639 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 ZNF541Q9H0D2 1346 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 SIP14410 1827 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 LRRIQ4A6NIV6 560 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 TLR3O15455 904 aaKnown RBP15.36■□□□□ 0.05
SMG9-211ENST00000601170 GJB6O95452 261 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 POTEJP0CG39 1038 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 GNPTABQ3T906 1256 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 PLEKHA7Q6IQ23 1121 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 TAX1BP1Q86VP1 789 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 CCDC89Q8N998 374 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 ANKRD42Q8N9B4 389 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 RBBP8NLQ8NC74 664 aaPredicted RBP15.36■□□□□ 0.05
SMG9-211ENST00000601170 SGSM3Q96HU1 749 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 CYP39A1Q9NYL5 469 aa15.36■□□□□ 0.05
SMG9-211ENST00000601170 SNX3O60493 162 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 CLTAP09496 248 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 ATP4AP20648 1035 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 OAZ1P54368 228 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 HMGCS2P54868 508 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 ZNF280AP59817 542 aaPredicted RBP15.35■□□□□ 0.05
SMG9-211ENST00000601170 NOP14P78316 857 aaKnown RBP15.35■□□□□ 0.05
SMG9-211ENST00000601170 TMEM132BQ14DG7 1078 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 IZUMO3Q5VZ72 239 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 TRPM8Q7Z2W7 1104 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 PHF13Q86YI8 300 aaPredicted RBP15.35■□□□□ 0.05
SMG9-211ENST00000601170 PARP9Q8IXQ6 854 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 DEPTORQ8TB45 409 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
SMG9-211ENST00000601170 ZKSCAN4Q969J2 545 aaPredicted RBP15.35■□□□□ 0.05
SMG9-211ENST00000601170 VCPIP1Q96JH7 1222 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 MLXIPLQ9NP71 852 aa15.35■□□□□ 0.05
SMG9-211ENST00000601170 KCNK9Q9NPC2 374 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms