RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 GUCY2FP51841 1108 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 AP3M2P53677 418 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 ENPEPQ07075 957 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 CTC1Q2NKJ3 1217 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 ISM2Q6H9L7 571 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 USP37Q86T82 979 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 RBM23Q86U06 439 aaKnown RBP14.93□□□□□ -0.02
SNRPA-208ENST00000600456 PPFIBP1Q86W92 1011 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 GPT2Q8TD30 523 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 AUTS2Q8WXX7 1259 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 RIN2Q8WYP3 895 aaPredicted RBP14.93□□□□□ -0.02
SNRPA-208ENST00000600456 HLA-CQ95604 372 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 CCDC127Q96BQ5 260 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 ANKRD36BP1Q96IX9 119 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 SUSD3Q96L08 255 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 CGRRF1Q99675 332 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 INTS13Q9NVM9 706 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 FNIP2Q9P278 1114 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 TRIP11Q15643 1979 aa14.93□□□□□ -0.02
SNRPA-208ENST00000600456 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.92□□□□□ -0.02
SNRPA-208ENST00000600456 M0QZQ0 153 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 TULP1O00294 542 aaPredicted RBP14.92□□□□□ -0.02
SNRPA-208ENST00000600456 C2CD2LO14523 706 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 PER2O15055 1255 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 CETN3O15182 167 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 CLASP2O75122 1294 aaKnown RBP14.92□□□□□ -0.02
SNRPA-208ENST00000600456 ADH1AP07327 375 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 CNPP09543 421 aaKnown RBP14.92□□□□□ -0.02
SNRPA-208ENST00000600456 IGFBP6P24592 240 aaPredicted RBP14.92□□□□□ -0.02
SNRPA-208ENST00000600456 CCNE1P24864 410 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 PSMC2P35998 433 aaKnown RBP14.92□□□□□ -0.02
SNRPA-208ENST00000600456 BRCC3P46736 316 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 NDUFV1P49821 464 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 LILRA4P59901 499 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 CLDN10P78369 228 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 FKBP3Q00688 224 aaKnown RBP14.92□□□□□ -0.02
SNRPA-208ENST00000600456 ADAM9Q13443 819 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 ADAM15Q13444 863 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 RTP2Q5QGT7 225 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 CEP135Q66GS9 1140 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 TMEM184AQ6ZMB5 413 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 ANKS3Q6ZW76 656 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 CEP57Q86XR8 500 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 LRRC52Q8N7C0 313 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 C1orf127Q8N9H9 656 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 APPL2Q8NEU8 664 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 TMC2Q8TDI7 906 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 B3GALT6Q96L58 329 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 ZNF560Q96MR9 790 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 KLHL5Q96PQ7 755 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 MKNK1Q9BUB5 465 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 MTMR12Q9C0I1 747 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 IGFLR1Q9H665 355 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 UBE2ZQ9H832 354 aaPredicted RBP14.92□□□□□ -0.02
SNRPA-208ENST00000600456 PCDHB8Q9UN66 801 aa14.92□□□□□ -0.02
SNRPA-208ENST00000600456 BICDL2A1A5D9 508 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 PPP1R3GB7ZBB8 358 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 PPEF2O14830 753 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 AKAP3O75969 853 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 DLATP10515 647 aaKnown RBP14.91□□□□□ -0.02
SNRPA-208ENST00000600456 CD44P16070 742 aaKnown RBP14.91□□□□□ -0.02
SNRPA-208ENST00000600456 TNNI1P19237 187 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 CASP4P49662 377 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 TAF6P49848 677 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 RBP5P82980 135 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 KCNC3Q14003 757 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 PSMD5Q16401 504 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 SV2CQ496J9 727 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 ANKRD40Q6AI12 368 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 INTS8Q75QN2 995 aaKnown RBP14.91□□□□□ -0.02
SNRPA-208ENST00000600456 ZC3H3Q8IXZ2 948 aaKnown RBP14.91□□□□□ -0.02
SNRPA-208ENST00000600456 FAM186BQ8IYM0 893 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 MLKLQ8NB16 471 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 OR5B17Q8NGF7 314 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 LNX1Q8TBB1 728 aaPredicted RBP14.91□□□□□ -0.02
SNRPA-208ENST00000600456 PARD3BQ8TEW8 1205 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 GZF1Q9H116 711 aaPredicted RBP14.91□□□□□ -0.02
SNRPA-208ENST00000600456 CLDND1Q9NY35 253 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 THEGQ9P2T0 379 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 MTRRQ9UBK8 725 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 R3HCC1Q9Y3T6 440 aaKnown RBP14.91□□□□□ -0.02
SNRPA-208ENST00000600456 BACE2Q9Y5Z0 518 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 ATG2AQ2TAZ0 1938 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 ANK1P16157 1881 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 PTPRJQ12913 1337 aa14.91□□□□□ -0.02
SNRPA-208ENST00000600456 H7C4K7 107 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 I3L4J1 428 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 IKBKBO14920 756 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 SLC16A3O15427 465 aaKnown RBP14.9□□□□□ -0.02
SNRPA-208ENST00000600456 TEX28O15482 410 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 ITGB3P05106 788 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 KRT13P13646 458 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 TYMPP19971 482 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 KLRC2P26717 231 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 TKTP29401 623 aaKnown RBP14.9□□□□□ -0.02
SNRPA-208ENST00000600456 POLR2BP30876 1174 aaKnown RBP14.9□□□□□ -0.02
SNRPA-208ENST00000600456 GTF2F1P35269 517 aaKnown RBP eCLIP14.9□□□□□ -0.025e-6■■■■□ 22
SNRPA-208ENST00000600456 AAK1Q2M2I8 961 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 DSTYKQ6XUX3 929 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 CSGALNACT2Q8N6G5 542 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms