RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 APPL2Q8NEU8 664 aa20.41■□□□□ 0.86
PNKP-213ENST00000599543 SUSD3Q96L08 255 aa20.41■□□□□ 0.86
PNKP-213ENST00000599543 PLEKHA5Q9HAU0 1116 aa20.41■□□□□ 0.86
PNKP-213ENST00000599543 PARVGQ9HBI0 331 aa20.41■□□□□ 0.86
PNKP-213ENST00000599543 TFIP11Q9UBB9 837 aaKnown RBP20.41■□□□□ 0.86
PNKP-213ENST00000599543 TUBGCP4Q9UGJ1 667 aa20.41■□□□□ 0.86
PNKP-213ENST00000599543 MRPS23Q9Y3D9 190 aaKnown RBP20.41■□□□□ 0.86
PNKP-213ENST00000599543 ARHGEF37A1IGU5 675 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 ABLIM3O94929 683 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 ATF2P15336 505 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 PLCG1P19174 1290 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 ANGPT1Q15389 498 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 KYAT1Q16773 422 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 ZNF280DQ6N043 979 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 NPAS3Q8IXF0 933 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 ING5Q8WYH8 240 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 KIF12Q96FN5 646 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 CHAMP1Q96JM3 812 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 USP28Q96RU2 1077 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 RPP25Q9BUL9 199 aaKnown RBP20.4■□□□□ 0.86
PNKP-213ENST00000599543 HAPLN2Q9GZV7 340 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 CYP4F11Q9HBI6 524 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 FBXL5Q9UKA1 691 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 TBX20Q9UMR3 447 aa20.4■□□□□ 0.86
PNKP-213ENST00000599543 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.4■□□□□ 0.86
PNKP-213ENST00000599543 TBC1D4O60343 1298 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 TBCAO75347 108 aaKnown RBP20.39■□□□□ 0.85
PNKP-213ENST00000599543 F13A1P00488 732 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 RHOP08100 348 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 MARCKSP29966 332 aaPredicted RBP20.39■□□□□ 0.85
PNKP-213ENST00000599543 SPAG1Q07617 926 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 MRPL58Q14197 206 aaKnown RBP20.39■□□□□ 0.85
PNKP-213ENST00000599543 KARSQ15046 597 aaKnown RBP20.39■□□□□ 0.85
PNKP-213ENST00000599543 TPGS2Q68CL5 300 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 PHLDB3Q6NSJ2 640 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 RAD54LQ92698 747 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 DDX12PQ92771 950 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 KCNN1Q92952 543 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 KXD1Q9BQD3 176 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 ZHX3Q9H4I2 956 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 ZSCAN16Q9H4T2 348 aaPredicted RBP20.39■□□□□ 0.85
PNKP-213ENST00000599543 BLOC1S4Q9NUP1 217 aa20.39■□□□□ 0.85
PNKP-213ENST00000599543 TTC26A0AVF1 554 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 TRAK2O60296 914 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 PTPN2P17706 415 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 TNFSF9P41273 254 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 ZNF131P52739 623 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 GPC5P78333 572 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 MCM6Q14566 821 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 PTPAQ15257 358 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 SLC5A9Q2M3M2 681 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 FRMD5Q7Z6J6 570 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 TCEAL8Q8IYN2 117 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 LRRC15Q8TF66 581 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 LARP4BQ92615 738 aaKnown RBP20.38■□□□□ 0.85
PNKP-213ENST00000599543 SHDQ96IW2 340 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 GDE1Q9NZC3 331 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 UBQLN1Q9UMX0 589 aaKnown RBP20.38■□□□□ 0.85
PNKP-213ENST00000599543 PCDHB8Q9UN66 801 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 ZDHHC9Q9Y397 364 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 SIT1Q9Y3P8 196 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 INSL5Q9Y5Q6 135 aa20.38■□□□□ 0.85
PNKP-213ENST00000599543 WDR87Q6ZQQ6 2873 aa20.37■□□□□ 0.85
PNKP-213ENST00000599543 ANK1P16157 1881 aa20.37■□□□□ 0.85
PNKP-213ENST00000599543 XPOTO43592 962 aaKnown RBP20.37■□□□□ 0.85
PNKP-213ENST00000599543 PIGRP01833 764 aa20.37■□□□□ 0.85
PNKP-213ENST00000599543 CPB1P15086 417 aa20.37■□□□□ 0.85
PNKP-213ENST00000599543 ABCD1P33897 745 aa20.37■□□□□ 0.85
PNKP-213ENST00000599543 SPECC1Q5M775 1068 aa20.37■□□□□ 0.85
PNKP-213ENST00000599543 ELMOD1Q8N336 334 aa20.37■□□□□ 0.85
PNKP-213ENST00000599543 CORO1BQ9BR76 489 aa20.37■□□□□ 0.85
PNKP-213ENST00000599543 RPF1Q9H9Y2 349 aaKnown RBP20.37■□□□□ 0.85
PNKP-213ENST00000599543 AVENQ9NQS1 362 aaPredicted RBP20.37■□□□□ 0.85
PNKP-213ENST00000599543 SPTBN4Q9H254 2564 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 PRR23AA6NEV1 266 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 OGTO15294 1046 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 DCNP07585 359 aaKnown RBP20.36■□□□□ 0.85
PNKP-213ENST00000599543 CYP3A5P20815 502 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 LRPAP1P30533 357 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 PFKPQ01813 784 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 YWHAHQ04917 246 aaPredicted RBP20.36■□□□□ 0.85
PNKP-213ENST00000599543 ADCY1Q08828 1119 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 ASCL5Q7RTU5 278 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 PJA1Q8NG27 643 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 NKD2Q969F2 451 aaPredicted RBP20.36■□□□□ 0.85
PNKP-213ENST00000599543 MCRS1Q96EZ8 462 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 CLIC6Q96NY7 704 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 MSTO1Q9BUK6 570 aa20.36■□□□□ 0.85
PNKP-213ENST00000599543 AFF4Q9UHB7 1163 aaKnown RBP20.36■□□□□ 0.85
PNKP-213ENST00000599543 LACTBL1A8MY62 500 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 M0QZQ0 153 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 FAM189A1O60320 539 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 SEC24AO95486 1093 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 CEBPBP17676 345 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 STARD6P59095 220 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 SNW1Q13573 536 aaKnown RBP20.35■□□□□ 0.85
PNKP-213ENST00000599543 ENOX2Q16206 610 aaKnown RBP20.35■□□□□ 0.85
PNKP-213ENST00000599543 ZBTB41Q5SVQ8 909 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 IQCEQ6IPM2 695 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 PDZD4Q76G19 769 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms