RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SP100P23497 879 aaPredicted RBP15.34■□□□□ 0.05
LIG1-218ENST00000599322 TKTP29401 623 aaKnown RBP15.34■□□□□ 0.05
LIG1-218ENST00000599322 LRPAP1P30533 357 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 RAB33AQ14088 237 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 E2F4Q16254 413 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 UVSSAQ2YD98 709 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 VARS2Q5ST30 1063 aaKnown RBP15.34■□□□□ 0.05
LIG1-218ENST00000599322 ZNF280DQ6N043 979 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 ARMCX5Q6P1M9 558 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 LILRA6Q6PI73 481 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 UNC13DQ70J99 1090 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 SUSD3Q96L08 255 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 CLSTN3Q9BQT9 956 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 RHOBTB2Q9BYZ6 727 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 HAPLN2Q9GZV7 340 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 TUBGCP4Q9UGJ1 667 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 CDY1Q9Y6F8 540 aa15.34■□□□□ 0.05
LIG1-218ENST00000599322 CITO14578 2027 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.33■□□□□ 0.04
LIG1-218ENST00000599322 PVALEFA0A1B0GWK0 134 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 PPP1R37O75864 691 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 PRPF6O94906 941 aaKnown RBP15.33■□□□□ 0.04
LIG1-218ENST00000599322 CMA1P23946 247 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 AFMP43652 599 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 ARPP19P56211 112 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 SURF1Q15526 300 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 CTXN3Q4LDR2 81 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 FAM26FQ5R3K3 315 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 SPATA1Q5VX52 437 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 JADE1Q6IE81 842 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 KANK3Q6NY19 840 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 SLC39A4Q6P5W5 647 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 HS2ST1Q7LGA3 356 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 ALYREFQ86V81 257 aaKnown RBP15.33■□□□□ 0.04
LIG1-218ENST00000599322 METTL23Q86XA0 190 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 LEO1Q8WVC0 666 aaPredicted RBP15.33■□□□□ 0.04
LIG1-218ENST00000599322 FAM213AQ9BRX8 229 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 PRKD2Q9BZL6 878 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 KIAA1586Q9HCI6 787 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 PCDHB8Q9UN66 801 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 POLIQ9UNA4 740 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 C2CD2Q9Y426 696 aa15.33■□□□□ 0.04
LIG1-218ENST00000599322 PRRG1O14668 218 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 EIF3DO15371 548 aaKnown RBP eCLIP15.32■□□□□ 0.04
LIG1-218ENST00000599322 C8AP07357 584 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 ADRB2P07550 413 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 SLFN14P0C7P3 912 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 ODC1P11926 461 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 GBP2P32456 591 aaPredicted RBP15.32■□□□□ 0.04
LIG1-218ENST00000599322 NHLH1Q02575 133 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 YWHAHQ04917 246 aaPredicted RBP15.32■□□□□ 0.04
LIG1-218ENST00000599322 ZBTB6Q15916 424 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 CNNM4Q6P4Q7 775 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 ZDHHC14Q8IZN3 488 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 C3orf58Q8NDZ4 430 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 EDAQ92838 391 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 STRA6Q9BX79 667 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 RBAKQ9NYW8 714 aaPredicted RBP15.32■□□□□ 0.04
LIG1-218ENST00000599322 FBXW11Q9UKB1 542 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 MYH15Q9Y2K3 1946 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 PIEZO1Q92508 2521 aa15.32■□□□□ 0.04
LIG1-218ENST00000599322 ZNF233A6NK53 670 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 EXTL3O43909 919 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 RFPL2O75678 378 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 KIF20AO95235 890 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 LRG1P02750 347 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 MYL1P05976 194 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 CPB1P15086 417 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 HOXA9P31269 272 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 SYKP43405 635 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 SNRPFP62306 86 aaKnown RBP15.31■□□□□ 0.04
LIG1-218ENST00000599322 ZBTB41Q5SVQ8 909 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 TPGS2Q68CL5 300 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 GPD1LQ8N335 351 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 ELMOD1Q8N336 334 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 ZNF461Q8TAF7 563 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 ZNF560Q96MR9 790 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 KCNH6Q9H252 994 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 WDR6Q9NNW5 1121 aaKnown RBP15.31■□□□□ 0.04
LIG1-218ENST00000599322 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 DPP3Q9NY33 737 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIG1-218ENST00000599322 CGNQ9P2M7 1197 aaKnown RBP15.31■□□□□ 0.04
LIG1-218ENST00000599322 SERTAD1Q9UHV2 236 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 DSEQ9UL01 958 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 MAFFQ9ULX9 164 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 UBE4BO95155 1302 aa15.31■□□□□ 0.04
LIG1-218ENST00000599322 A0A1B0GVL5 298 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 C2CD4DB7Z1M9 353 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 TISP43B9A030 160 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 FAM189A1O60320 539 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 CLUHO75153 1309 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 PFKFB1P16118 471 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 PNPLA4P41247 253 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 TAF6P49848 677 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 CASP5P51878 434 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
LIG1-218ENST00000599322 KCNA1Q09470 495 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 PSMD2Q13200 908 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 MTMR3Q13615 1198 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms