RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 CDH22Q9UJ99 828 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 NUB1Q9Y5A7 615 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 IRAK3Q9Y616 596 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 PPEF2O14830 753 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 CLIC2O15247 247 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 LILRB3O75022 631 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 RPN1P04843 607 aaKnown RBP13.09□□□□□ -0.31
ZNF548-209ENST00000598895 WEE2P0C1S8 567 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 TKTP29401 623 aaKnown RBP13.09□□□□□ -0.31
ZNF548-209ENST00000598895 ZNF75DP51815 510 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 WNT7BP56706 349 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 EHHADHQ08426 723 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 POSTNQ15063 836 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 ANO6Q4KMQ2 910 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 FEZF2Q8TBJ5 459 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 ZNF507Q8TCN5 953 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 SLC22A17Q8WUG5 538 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 SCFD1Q8WVM8 642 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 CASP10Q92851 521 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
ZNF548-209ENST00000598895 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 UHRF1Q96T88 793 aaPredicted RBP13.09□□□□□ -0.31
ZNF548-209ENST00000598895 TTPALQ9BTX7 342 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 CBX8Q9HC52 389 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 UBQLN1Q9UMX0 589 aaKnown RBP13.09□□□□□ -0.31
ZNF548-209ENST00000598895 SSX2IPQ9Y2D8 614 aa13.09□□□□□ -0.31
ZNF548-209ENST00000598895 GOLGA6L19H0YKK7 550 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 TMEM189-UBE2V1I3L0A0 370 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 EIF3DO15371 548 aaKnown RBP eCLIP13.08□□□□□ -0.32
ZNF548-209ENST00000598895 GARTP22102 1010 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 CLCN4P51793 760 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 STK4Q13043 487 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 SMAD4Q13485 552 aaKnown RBP13.08□□□□□ -0.32
ZNF548-209ENST00000598895 TMEM132DQ14C87 1099 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 ZBTB6Q15916 424 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 PSMD5Q16401 504 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 STX1AQ16623 288 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 RARS2Q5T160 578 aaKnown RBP13.08□□□□□ -0.32
ZNF548-209ENST00000598895 SYCE2Q6PIF2 218 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 SARM1Q6SZW1 724 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 DRC7Q8IY82 874 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 GPD1LQ8N335 351 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 ZNF830Q96NB3 372 aaPredicted RBP13.08□□□□□ -0.32
ZNF548-209ENST00000598895 RBAKQ9NYW8 714 aaPredicted RBP13.08□□□□□ -0.32
ZNF548-209ENST00000598895 USP15Q9Y4E8 981 aaPredicted RBP13.08□□□□□ -0.32
ZNF548-209ENST00000598895 UNC80Q8N2C7 3258 aa13.08□□□□□ -0.32
ZNF548-209ENST00000598895 TGFB1I1O43294 461 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 XPOTO43592 962 aaKnown RBP13.07□□□□□ -0.32
ZNF548-209ENST00000598895 TRAPPC3O43617 180 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 LDHAP00338 332 aaKnown RBP13.07□□□□□ -0.32
ZNF548-209ENST00000598895 ADH1AP07327 375 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 FGFR3P22607 806 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 RPL9P32969 192 aaKnown RBP13.07□□□□□ -0.32
ZNF548-209ENST00000598895 ZNF165P49910 485 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 CYP2J2P51589 502 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 DPYDQ12882 1025 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 ELAVL2Q12926 359 aaKnown RBP13.07□□□□□ -0.32
ZNF548-209ENST00000598895 PNOCQ13519 176 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 SYCP1Q15431 976 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 PUS10Q3MIT2 529 aaKnown RBP13.07□□□□□ -0.32
ZNF548-209ENST00000598895 TMEM184AQ6ZMB5 413 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 PPFIBP1Q86W92 1011 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 CD302Q8IX05 232 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 FMR1NBQ8N0W7 255 aaPredicted RBP13.07□□□□□ -0.32
ZNF548-209ENST00000598895 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 SMRP1Q8NCR6 262 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 BEST2Q8NFU1 509 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 LNX1Q8TBB1 728 aaPredicted RBP13.07□□□□□ -0.32
ZNF548-209ENST00000598895 ERCC4Q92889 916 aaPredicted RBP13.07□□□□□ -0.32
ZNF548-209ENST00000598895 FBXL18Q96ME1 805 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 TRIM5Q9C035 493 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 RXFP1Q9HBX9 757 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 AGPAT3Q9NRZ7 376 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 HSPBP1Q9NZL4 362 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 MAPK8IP1Q9UQF2 711 aa13.07□□□□□ -0.32
ZNF548-209ENST00000598895 ADAM12O43184 909 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 EXTL3O43909 919 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 GLUD1P00367 558 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 ADRB2P07550 413 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 SP100P23497 879 aaPredicted RBP13.06□□□□□ -0.32
ZNF548-209ENST00000598895 LRPAP1P30533 357 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 ARPP19P56211 112 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 TFAMQ00059 246 aaKnown RBP13.06□□□□□ -0.32
ZNF548-209ENST00000598895 CAMK4Q16566 473 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 SPATA1Q5VX52 437 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 LMBRD2Q68DH5 695 aaPredicted RBP13.06□□□□□ -0.32
ZNF548-209ENST00000598895 TMC5Q6UXY8 1006 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 CBWD2Q8IUF1 395 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 BRSK2Q8IWQ3 736 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 SPC24Q8NBT2 197 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 PIK3R5Q8WYR1 880 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 CCDC47Q96A33 483 aaKnown RBP13.06□□□□□ -0.32
ZNF548-209ENST00000598895 CLSTN3Q9BQT9 956 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 NAT10Q9H0A0 1025 aaKnown RBP13.06□□□□□ -0.32
ZNF548-209ENST00000598895 S1PR5Q9H228 398 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 KCNF1Q9H3M0 494 aa13.06□□□□□ -0.32
ZNF548-209ENST00000598895 ASB7Q9H672 318 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms