RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ANKRD36BP1Q96IX9 119 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 FAM84AQ96KN4 292 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 B3GALT6Q96L58 329 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 POP1Q99575 1024 aaKnown RBP15.52■□□□□ 0.08
LIG1-208ENST00000595758 CGRRF1Q99675 332 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 TTPALQ9BTX7 342 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 MTMR12Q9C0I1 747 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 IGFLR1Q9H665 355 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 IRAK3Q9Y616 596 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 ANK1P16157 1881 aa15.52■□□□□ 0.07
LIG1-208ENST00000595758 PTPRJQ12913 1337 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 BICDL2A1A5D9 508 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 TRIM49BA6NDI0 452 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 PPEF2O14830 753 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 PER2O15055 1255 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 LILRB3O75022 631 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 FGFR3P22607 806 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 PAX3P23760 479 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 NRIP1P48552 1158 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 HYAL1Q12794 435 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.51■□□□□ 0.07
LIG1-208ENST00000595758 GPR65Q8IYL9 337 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 FAM186BQ8IYM0 893 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 CSGALNACT2Q8N6G5 542 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 C1orf127Q8N9H9 656 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 MLKLQ8NB16 471 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 OR5B17Q8NGF7 314 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 PLEKHO2Q8TD55 490 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 PARD3BQ8TEW8 1205 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 EEF2KMTQ96G04 330 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 SUSD3Q96L08 255 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 GZF1Q9H116 711 aaPredicted RBP15.51■□□□□ 0.07
LIG1-208ENST00000595758 ITGA11Q9UKX5 1188 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 AGAP1Q9UPQ3 857 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 CTNND2Q9UQB3 1225 aa15.51■□□□□ 0.07
LIG1-208ENST00000595758 NCK2O43639 380 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 ITGB3P05106 788 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 KRT13P13646 458 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 POLR2BP30876 1174 aaKnown RBP15.5■□□□□ 0.07
LIG1-208ENST00000595758 GTF2F1P35269 517 aaKnown RBP eCLIP15.5■□□□□ 0.07
LIG1-208ENST00000595758 LILRA4P59901 499 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 RBP5P82980 135 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 PAK1Q13153 545 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 DUSP6Q16828 381 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 RTP2Q5QGT7 225 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 CCDC183Q5T5S1 534 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 TTI2Q6NXR4 508 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 FOXR2Q6PJQ5 311 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 INTS8Q75QN2 995 aaKnown RBP15.5■□□□□ 0.07
LIG1-208ENST00000595758 TRAPPC11Q7Z392 1133 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 USP37Q86T82 979 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 ZC3H3Q8IXZ2 948 aaKnown RBP15.5■□□□□ 0.07
LIG1-208ENST00000595758 TMC2Q8TDI7 906 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 CDCA3Q99618 268 aaPredicted RBP15.5■□□□□ 0.07
LIG1-208ENST00000595758 MKNK1Q9BUB5 465 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 EMILIN2Q9BXX0 1053 aa15.5■□□□□ 0.07
LIG1-208ENST00000595758 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.5■□□□□ 0.07
LIG1-208ENST00000595758 R3HCC1Q9Y3T6 440 aaKnown RBP15.5■□□□□ 0.07
LIG1-208ENST00000595758 LRRIQ3A6PVS8 624 aaPredicted RBP15.49■□□□□ 0.07
LIG1-208ENST00000595758 SYN3O14994 580 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 SPTLC1O15269 473 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 CLASP2O75122 1294 aaKnown RBP15.49■□□□□ 0.07
LIG1-208ENST00000595758 KRT19P08727 400 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 CNPP09543 421 aaKnown RBP15.49■□□□□ 0.07
LIG1-208ENST00000595758 EPB41P11171 864 aaKnown RBP15.49■□□□□ 0.07
LIG1-208ENST00000595758 PTMSP20962 102 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 TKTP29401 623 aaKnown RBP15.49■□□□□ 0.07
LIG1-208ENST00000595758 PNPLA4P41247 253 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 AARSP49588 968 aaKnown RBP eCLIP15.49■□□□□ 0.07
LIG1-208ENST00000595758 TAF6P49848 677 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 VAMP7P51809 220 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 AP3M2P53677 418 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 STX17P56962 302 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 NLRP12P59046 1061 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 CLDN10P78369 228 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 PDXDC1Q6P996 788 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 PRSS55Q6UWB4 352 aaPredicted RBP15.49■□□□□ 0.07
LIG1-208ENST00000595758 DSTYKQ6XUX3 929 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 RBM43Q6ZSC3 357 aaKnown RBP15.49■□□□□ 0.07
LIG1-208ENST00000595758 EFHBQ8N7U6 833 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 APPL2Q8NEU8 664 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 CXorf38Q8TB03 319 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 LNX1Q8TBB1 728 aaPredicted RBP15.49■□□□□ 0.07
LIG1-208ENST00000595758 PIK3R5Q8WYR1 880 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 ZNF516Q92618 1163 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 ZNF560Q96MR9 790 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 KLHL5Q96PQ7 755 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 DUSP9Q99956 384 aaKnown RBP15.49■□□□□ 0.07
LIG1-208ENST00000595758 RXFP1Q9HBX9 757 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 SIX4Q9UIU6 781 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 RWDD2AQ9UIY3 292 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 PCDHB8Q9UN66 801 aa15.49■□□□□ 0.07
LIG1-208ENST00000595758 FSD2A1L4K1 749 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 M0QZQ0 153 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 IKBKBO14920 756 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 SLC16A3O15427 465 aaKnown RBP15.48■□□□□ 0.07
LIG1-208ENST00000595758 PHACTR2O75167 634 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 KLRC2P26717 231 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 DLG4P78352 724 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 CREMQ03060 361 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms