RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 CERS4Q9HA82 394 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 SPG21Q9NZD8 308 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 SCN1AP35498 2009 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 CARNS1A5YM72 827 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 KCNJ18B7U540 433 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 TMEM189-UBE2V1I3L0A0 370 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 B3GAT3O94766 335 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 GTF2H1P32780 548 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 KCNJ12Q14500 433 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 TCP11X2Q5H9J9 407 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 FAM200AQ8TCP9 573 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 COLEC11Q9BWP8 271 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 FGF18O76093 207 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 VNN1O95497 513 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 EFEMP2O95967 443 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 RB1P06400 928 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 POLR2BP30876 1174 aaKnown RBP24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 CBWD6Q4V339 395 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 CBWD3Q5JTY5 395 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 CBWD5Q5RIA9 395 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 ZNF576Q9H609 170 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 MMRN2Q9H8L6 949 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 TMEM8AQ9HCN3 771 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 AGAP1Q9UPQ3 857 aa24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.33■■□□□ 1.49
SNRNP70-204ENST00000595231 TRANK1O15050 2925 aa24.32■■□□□ 1.48
SNRNP70-204ENST00000595231 EEF1GP26641 437 aaKnown RBP24.32■■□□□ 1.48
SNRNP70-204ENST00000595231 PPM1AP35813 382 aa24.32■■□□□ 1.48
SNRNP70-204ENST00000595231 HASPINQ8TF76 798 aa24.32■■□□□ 1.48
SNRNP70-204ENST00000595231 TTYH1Q9H313 450 aaPredicted RBP24.32■■□□□ 1.48
SNRNP70-204ENST00000595231 MAGEC2Q9UBF1 373 aaPredicted RBP24.32■■□□□ 1.48
SNRNP70-204ENST00000595231 ADAM28Q9UKQ2 775 aa24.32■■□□□ 1.48
SNRNP70-204ENST00000595231 BECN2A8MW95 431 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 STX10O60499 249 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 KRT19P08727 400 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 LILRA4P59901 499 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 RBP5P82980 135 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 PLCB3Q01970 1234 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 KCNH2Q12809 1159 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 KRT39Q6A163 491 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 ARNTL2Q8WYA1 636 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 TUBGCP2Q9BSJ2 902 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 VN1R3Q9BXE9 311 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 PLXNA4Q9HCM2 1894 aa24.31■■□□□ 1.48
SNRNP70-204ENST00000595231 EPOPA6NHQ4 379 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 SPTLC1O15269 473 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 TADA2AO75478 443 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 MTIF2P46199 727 aaKnown RBP24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 FMO5P49326 533 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 BIRC3Q13489 604 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 TMEM169Q96HH4 297 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 GPR62Q9BZJ7 368 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 ALG13Q9NP73 1137 aaKnown RBP24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 TMEM265A0A087WTH1 108 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 H3BNC9 293 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 ATP1A3P13637 1013 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 AARSP49588 968 aaKnown RBP eCLIP24.3■■□□□ 1.481e-6■□□□□ 8.7
SNRNP70-204ENST00000595231 MXI1P50539 228 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 MIIPQ5JXC2 388 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 RNF168Q8IYW5 571 aaPredicted RBP24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 LRRC52Q8N7C0 313 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 FBXO22Q8NEZ5 403 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 TAS1R2Q8TE23 839 aa24.3■■□□□ 1.48
SNRNP70-204ENST00000595231 PMM2O15305 246 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 PHACTR2O75167 634 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 AFPP02771 609 aaKnown RBP24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 BRCC3P46736 316 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 MYL6P60660 151 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 NCOA4Q13772 614 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 KRT31Q15323 416 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 MAN2A1Q16706 1144 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 TIGD5Q53EQ6 642 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 SPPL3Q8TCT6 385 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 C11orf84Q9BUA3 381 aaPredicted RBP24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 XYLT2Q9H1B5 865 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 COQ4Q9Y3A0 265 aa24.29■■□□□ 1.48
SNRNP70-204ENST00000595231 MYO9BQ13459 2157 aa24.28■■□□□ 1.48
SNRNP70-204ENST00000595231 LRRC10BA6NIK2 292 aa24.28■■□□□ 1.48
SNRNP70-204ENST00000595231 LRRN2O75325 713 aa24.28■■□□□ 1.48
SNRNP70-204ENST00000595231 FUT10Q6P4F1 479 aa24.28■■□□□ 1.48
SNRNP70-204ENST00000595231 TAS1R1Q7RTX1 841 aa24.28■■□□□ 1.48
SNRNP70-204ENST00000595231 APTXQ7Z2E3 356 aaKnown RBP24.28■■□□□ 1.48
SNRNP70-204ENST00000595231 DDX53Q86TM3 631 aaKnown RBP24.28■■□□□ 1.48
SNRNP70-204ENST00000595231 LIMA1Q9UHB6 759 aaKnown RBP24.28■■□□□ 1.48
SNRNP70-204ENST00000595231 NUB1Q9Y5A7 615 aa24.28■■□□□ 1.48
SNRNP70-204ENST00000595231 I3L4J1 428 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 HLA-DRAP01903 254 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 DNAJB1P25685 340 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 PNPLA4P41247 253 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 TAF6P49848 677 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 KRT17Q04695 432 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 GPM6BQ13491 265 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 TRPC3Q13507 836 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 GAS2L3Q86XJ1 694 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 SEMA4DQ92854 862 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 HPDLQ96IR7 371 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 KPNA7A9QM74 516 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 GRM6O15303 877 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 PRKCSHP14314 528 aaPredicted RBP24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 CDK11BP21127 795 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms