RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 RTL10Q7L3V2 364 aa18.83■□□□□ 0.6
IRF3-208ENST00000594387 STRA6Q9BX79 667 aa18.83■□□□□ 0.6
IRF3-208ENST00000594387 PRKD2Q9BZL6 878 aa18.83■□□□□ 0.6
IRF3-208ENST00000594387 USP25Q9UHP3 1055 aa18.83■□□□□ 0.6
IRF3-208ENST00000594387 FBXW11Q9UKB1 542 aa18.83■□□□□ 0.6
IRF3-208ENST00000594387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.82■□□□□ 0.6
IRF3-208ENST00000594387 PRR33A8MZF0 331 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 C2CD4DB7Z1M9 353 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 KIAA0391O15091 583 aaKnown RBP18.82■□□□□ 0.6
IRF3-208ENST00000594387 FAM189A1O60320 539 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 RFPL2O75678 378 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 PRPF6O94906 941 aaKnown RBP18.82■□□□□ 0.6
IRF3-208ENST00000594387 ADRB2P07550 413 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 GBP2P32456 591 aaPredicted RBP18.82■□□□□ 0.6
IRF3-208ENST00000594387 AFMP43652 599 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 ARPP19P56211 112 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 ZBTB6Q15916 424 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 SPATA1Q5VX52 437 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 ZNF280DQ6N043 979 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 ARMCX5Q6P1M9 558 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 NT5DC4Q86YG4 428 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 ZDHHC14Q8IZN3 488 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 ZNF461Q8TAF7 563 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 CACTINQ8WUQ7 758 aaKnown RBP18.82■□□□□ 0.6
IRF3-208ENST00000594387 LEO1Q8WVC0 666 aaPredicted RBP18.82■□□□□ 0.6
IRF3-208ENST00000594387 EDAQ92838 391 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 FAM213AQ9BRX8 229 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 LRFN3Q9BTN0 628 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 OXCT2Q9BYC2 517 aaPredicted RBP18.82■□□□□ 0.6
IRF3-208ENST00000594387 WDR6Q9NNW5 1121 aaKnown RBP18.82■□□□□ 0.6
IRF3-208ENST00000594387 PCDHB8Q9UN66 801 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 POLIQ9UNA4 740 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 R3HCC1Q9Y3T6 440 aaKnown RBP18.82■□□□□ 0.6
IRF3-208ENST00000594387 C2CD2Q9Y426 696 aa18.82■□□□□ 0.6
IRF3-208ENST00000594387 TISP43B9A030 160 aa18.81■□□□□ 0.6
IRF3-208ENST00000594387 MEFVO15553 781 aaPredicted RBP18.81■□□□□ 0.6
IRF3-208ENST00000594387 C8AP07357 584 aa18.81■□□□□ 0.6
IRF3-208ENST00000594387 CMA1P23946 247 aa18.81■□□□□ 0.6
IRF3-208ENST00000594387 IGFBP6P24592 240 aaPredicted RBP18.81■□□□□ 0.6
IRF3-208ENST00000594387 CASP5P51878 434 aa18.81■□□□□ 0.6
IRF3-208ENST00000594387 KCNA1Q09470 495 aa18.81■□□□□ 0.6
IRF3-208ENST00000594387 FAM26FQ5R3K3 315 aa18.81■□□□□ 0.6
IRF3-208ENST00000594387 CNNM4Q6P4Q7 775 aa18.81■□□□□ 0.6
IRF3-208ENST00000594387 UNC13DQ70J99 1090 aa18.81■□□□□ 0.6
IRF3-208ENST00000594387 SCN1AP35498 2009 aa18.81■□□□□ 0.6
IRF3-208ENST00000594387 DOCK6Q96HP0 2047 aa18.81■□□□□ 0.6
IRF3-208ENST00000594387 CLUHO75153 1309 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 XIRP2A4UGR9 3374 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 PVALEFA0A1B0GWK0 134 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 FAM86C2PA6NEL3 165 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 PRRG1O14668 218 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 EIF3DO15371 548 aaKnown RBP eCLIP18.8■□□□□ 0.6
IRF3-208ENST00000594387 HOXA9P31269 272 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 NUCB2P80303 420 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 ZXDAP98168 799 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 YWHAHQ04917 246 aaPredicted RBP18.8■□□□□ 0.6
IRF3-208ENST00000594387 PTPN21Q16825 1174 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 GPD1LQ8N335 351 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 SLC7A14Q8TBB6 771 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 CCDC47Q96A33 483 aaKnown RBP18.8■□□□□ 0.6
IRF3-208ENST00000594387 CCDC34Q96HJ3 373 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 PCIF1Q9H4Z3 704 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 DPP3Q9NY33 737 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 LIMD1Q9UGP4 676 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 SERTAD1Q9UHV2 236 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 SORCS3Q9UPU3 1222 aa18.8■□□□□ 0.6
IRF3-208ENST00000594387 A0A1B0GVL5 298 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 M0QZQ0 153 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 ADAM12O43184 909 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 EXTL3O43909 919 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 LRG1P02750 347 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 NFICP08651 508 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 SLFN14P0C7P3 912 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 ODC1P11926 461 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 CPB1P15086 417 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 COL9A1P20849 921 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 ADSSP30520 456 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 MTMR3Q13615 1198 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 C9orf57Q5W0N0 161 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 TPGS2Q68CL5 300 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 SLC8B1Q6J4K2 584 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 METTL23Q86XA0 190 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 SAAL1Q96ER3 474 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 BLZF1Q9H2G9 400 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 KIAA1586Q9HCI6 787 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 RBAKQ9NYW8 714 aaPredicted RBP18.79■□□□□ 0.6
IRF3-208ENST00000594387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.79■□□□□ 0.66e-9■■■□□ 17.9
IRF3-208ENST00000594387 FBXL5Q9UKA1 691 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 ZDHHC9Q9Y397 364 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 HCN4Q9Y3Q4 1203 aa18.79■□□□□ 0.6
IRF3-208ENST00000594387 UBE4BO95155 1302 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 GOLGA6L4A6NEF3 574 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 PFKFB1P16118 471 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 SYKP43405 635 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 TAF6P49848 677 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 GUCY2FP51841 1108 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 LILRA4P59901 499 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 TFAMQ00059 246 aaKnown RBP18.78■□□□□ 0.6
IRF3-208ENST00000594387 ROR1Q01973 937 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 SURF1Q15526 300 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms