RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 NTPCRQ9BSD7 190 aaKnown RBP17.54■□□□□ 0.4
LIG1-206ENST00000594067 SUN1O94901 812 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 GH1P01241 217 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 CETPP11597 493 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 MAN1A1P33908 653 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 SLC1A1P43005 524 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 WNT7BP56706 349 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 TAS2R40P59535 323 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 NUGGCQ68CJ6 796 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 SEPT14Q6ZU15 432 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 SYDE1Q6ZW31 735 aaPredicted RBP17.54■□□□□ 0.4
LIG1-206ENST00000594067 ENOSF1Q7L5Y1 443 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 TAS1R3Q7RTX0 852 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 NLRX1Q86UT6 975 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 FAM83AQ86UY5 434 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 SAMD3Q8N6K7 520 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 TRAIPQ9BWF2 469 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 USTQ9Y2C2 406 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 PCDHB2Q9Y5E7 798 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 BRAFP15056 766 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 SSR1P43307 286 aaKnown RBP17.53■□□□□ 0.4
LIG1-206ENST00000594067 COPS2P61201 443 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 PROSCO94903 275 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 HLA-DRAP01903 254 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 TNNI1P19237 187 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 ATP5DP30049 168 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 SWSAP1Q6NVH7 229 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 GBP7Q8N8V2 638 aaPredicted RBP17.53■□□□□ 0.4
LIG1-206ENST00000594067 FAM81BQ96LP2 452 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 C9orf72Q96LT7 481 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 XPNPEP1Q9NQW7 623 aa17.53■□□□□ 0.4
LIG1-206ENST00000594067 GJB6O95452 261 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 KRT16P08779 473 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 MYBL1P10243 752 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 CD58P19256 250 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 BAATQ14032 418 aaPredicted RBP17.52■□□□□ 0.4
LIG1-206ENST00000594067 ZKSCAN8Q15776 578 aaPredicted RBP17.52■□□□□ 0.4
LIG1-206ENST00000594067 WDR44Q5JSH3 913 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 C15orf39Q6ZRI6 1047 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 ZNF365Q70YC5 407 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 ANKS1BQ7Z6G8 1248 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 FITM2Q8N6M3 262 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 LPAR1Q92633 364 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 PRCCQ92733 491 aaPredicted RBP17.52■□□□□ 0.4
LIG1-206ENST00000594067 KLHL29Q96CT2 875 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 WNK4Q96J92 1243 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 ARHGEF3Q9NR81 526 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 SEPT9Q9UHD8 586 aaPredicted RBP17.52■□□□□ 0.4
LIG1-206ENST00000594067 PNMA3Q9UL41 463 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 RIPK3Q9Y572 518 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 UMODL1Q5DID0 1318 aa17.52■□□□□ 0.4
LIG1-206ENST00000594067 CCDC189A1A4V9 331 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 ZC3H11AO75152 810 aaKnown RBP eCLIP17.52■□□□□ 0.392e-8■■■■□ 25.1
LIG1-206ENST00000594067 STBD1O95210 358 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 CYP1A1P04798 512 aaPredicted RBP17.52■□□□□ 0.39
LIG1-206ENST00000594067 GARTP22102 1010 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 DSG3P32926 999 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 CENPCQ03188 943 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 KLF1Q13351 362 aaPredicted RBP17.52■□□□□ 0.39
LIG1-206ENST00000594067 BRDTQ58F21 947 aaPredicted RBP17.52■□□□□ 0.39
LIG1-206ENST00000594067 PAXIP1Q6ZW49 1069 aaPredicted RBP17.52■□□□□ 0.39
LIG1-206ENST00000594067 MON1BQ7L1V2 547 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 KIF2BQ8N4N8 673 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 CKAP2Q8WWK9 683 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 TRIM11Q96F44 468 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 FNBP1Q96RU3 617 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 KLHL11Q9NVR0 708 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 NOP53Q9NZM5 478 aaKnown RBP17.52■□□□□ 0.39
LIG1-206ENST00000594067 PRKAG3Q9UGI9 489 aa17.52■□□□□ 0.39
LIG1-206ENST00000594067 A8MUI8 341 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 PIK3CAP42336 1068 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 ACOT2P49753 483 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 CAV1Q03135 178 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 TDRD10Q5VZ19 366 aaKnown RBP17.51■□□□□ 0.39
LIG1-206ENST00000594067 IZUMO3Q5VZ72 239 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 OSBPL8Q9BZF1 889 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 MAP3K20Q9NYL2 800 aaKnown RBP17.51■□□□□ 0.39
LIG1-206ENST00000594067 ARL2BPQ9Y2Y0 163 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 NEU2Q9Y3R4 380 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 WNT10BO00744 389 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 CCND1P24385 295 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 LIG4P49917 911 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 NLRP11P59045 1033 aaKnown RBP17.51■□□□□ 0.39
LIG1-206ENST00000594067 MAP3K10Q02779 954 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 ASRGL1Q7L266 308 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 SPATA21Q7Z572 469 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 ZNF677Q86XU0 584 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 SRRM1Q8IYB3 904 aaKnown RBP17.51■□□□□ 0.39
LIG1-206ENST00000594067 KIAA1683Q9H0B3 1180 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 POLR3FQ9H1D9 316 aaPredicted RBP17.51■□□□□ 0.39
LIG1-206ENST00000594067 C17orf75Q9HAS0 396 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 ADAM22Q9P0K1 906 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 NAALADL1Q9UQQ1 740 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 COL4A5P29400 1685 aa17.51■□□□□ 0.39
LIG1-206ENST00000594067 ZBED4O75132 1171 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 PTPRJQ12913 1337 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 RHOT1Q8IXI2 618 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 RPAP3Q9H6T3 665 aaPredicted RBP17.5■□□□□ 0.39
LIG1-206ENST00000594067 PCDHB4Q9Y5E5 795 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms