RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 A0A1B0GVL5 298 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 PPEF2O14830 753 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 ACTN4O43707 911 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 GPR37L1O60883 481 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 ZMYND10O75800 440 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 SLFN14P0C7P3 912 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 GARTP22102 1010 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 MCM4P33991 863 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 AFMP43652 599 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 AARSP49588 968 aaKnown RBP eCLIP20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 CUL4BQ13620 913 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 ELMSAN1Q6PJG2 1045 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 CYP26C1Q6V0L0 522 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 UNC13DQ70J99 1090 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 EPM2AIP1Q7L775 607 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 GRAMD1CQ8IYS0 662 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 SYCP3Q8IZU3 236 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 PYM1Q9BRP8 204 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 CBWD1Q9BRT8 395 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 TMEM206Q9H813 350 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 ZDHHC7Q9NXF8 308 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 HPSEQ9Y251 543 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 ATP6V1DQ9Y5K8 247 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 CDY1Q9Y6F8 540 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 MYO10Q9HD67 2058 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 ANK1P16157 1881 aa20.07■□□□□ 0.8
SHKBP1-202ENST00000593764 FAM86C2PA6NEL3 165 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 M0QZQ0 153 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 XPOTO43592 962 aaKnown RBP20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 PFKFB1P16118 471 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 WNT7BP56706 349 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 TMEM132DQ14C87 1099 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 SLC8B1Q6J4K2 584 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 BEST2Q8NFU1 509 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 ZNF507Q8TCN5 953 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 SAAL1Q96ER3 474 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 FAM213AQ9BRX8 229 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 PRKD2Q9BZL6 878 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 PCDHB8Q9UN66 801 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 USTQ9Y2C2 406 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 C2CD2Q9Y426 696 aa20.06■□□□□ 0.8
SHKBP1-202ENST00000593764 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 FAM237AA0A1B0GTK4 181 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 ANO9A1A5B4 782 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 EIF3DO15371 548 aaKnown RBP eCLIP20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 TMEM31Q5JXX7 168 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 FAM26FQ5R3K3 315 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 C9orf57Q5W0N0 161 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 EFCAB13Q8IY85 973 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 CEP57L1Q8IYX8 460 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 SMG7Q92540 1137 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 PAGE5Q96GU1 130 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 LRFN3Q9BTN0 628 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 SCAND2PQ9GZW5 306 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 WDR6Q9NNW5 1121 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 DOCK6Q96HP0 2047 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 DENND4AQ7Z401 1863 aa20.05■□□□□ 0.8
SHKBP1-202ENST00000593764 PVALEFA0A1B0GWK0 134 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 GOLGA8IPA6NC78 632 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 GOLGA8JA6NMD2 632 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 PIRO00625 290 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 ABLIM3O94929 683 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 LILRA4P59901 499 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 ROR1Q01973 937 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 CCDC149Q6ZUS6 474 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 STXBP4Q6ZWJ1 553 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 BRSK2Q8IWQ3 736 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 ZDHHC14Q8IZN3 488 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 APPL2Q8NEU8 664 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 EDAQ92838 391 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 PCIF1Q9H4Z3 704 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 FBXL5Q9UKA1 691 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 TECTAO75443 2155 aa20.04■□□□□ 0.8
SHKBP1-202ENST00000593764 WDR27A2RRH5 827 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 H7C4K7 107 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 SPTLC1O15269 473 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 KLRC4O43908 158 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 EXTL3O43909 919 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 N4BP1O75113 896 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 OAZ2O95190 189 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 IL18RAPO95256 599 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 LDHAP00338 332 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 C8AP07357 584 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 NDUFA8P51970 172 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 UVSSAQ2YD98 709 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 ARMCX5Q6P1M9 558 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 TDRD5Q8NAT2 981 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 ZNF461Q8TAF7 563 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 SCFD1Q8WVM8 642 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 GDPD2Q9HCC8 539 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 DPP3Q9NY33 737 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 LIMD1Q9UGP4 676 aa20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 TIMM13Q9Y5L4 95 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-202ENST00000593764 SCN1AP35498 2009 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 TGFB1I1O43294 461 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 HNRNPA1P09651 372 aaKnown RBP eCLIP20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 HOXA9P31269 272 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 ZXDAP98168 799 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 CTXN3Q4LDR2 81 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms