RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 DRC1Q96MC2 740 aa19.11■□□□□ 0.65
RETREG3-212ENST00000593251 ZSWIM3Q96MP5 696 aa19.11■□□□□ 0.65
RETREG3-212ENST00000593251 RAB34Q9BZG1 259 aa19.11■□□□□ 0.65
RETREG3-212ENST00000593251 BRD9Q9H8M2 597 aa19.11■□□□□ 0.65
RETREG3-212ENST00000593251 ANKFY1Q9P2R3 1169 aa19.11■□□□□ 0.65
RETREG3-212ENST00000593251 DAXXQ9UER7 740 aaPredicted RBP19.11■□□□□ 0.65
RETREG3-212ENST00000593251 NDRG2Q9UN36 371 aaKnown RBP19.11■□□□□ 0.65
RETREG3-212ENST00000593251 SPTLC1O15269 473 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 NCAM2O15394 837 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 GJA1P17302 382 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 RPL9P32969 192 aaKnown RBP19.1■□□□□ 0.65
RETREG3-212ENST00000593251 HMGN5P82970 282 aaKnown RBP19.1■□□□□ 0.65
RETREG3-212ENST00000593251 ADCY1Q08828 1119 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 PUM1Q14671 1186 aaKnown RBP eCLIP19.1■□□□□ 0.65
RETREG3-212ENST00000593251 ZRSR1Q15695 479 aaKnown RBP19.1■□□□□ 0.65
RETREG3-212ENST00000593251 PDZD4Q76G19 769 aaPredicted RBP19.1■□□□□ 0.65
RETREG3-212ENST00000593251 DDX12PQ92771 950 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 SUSD3Q96L08 255 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 TBC1D32Q96NH3 1257 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 NELL2Q99435 816 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 MMTAG2Q9BU76 263 aaKnown RBP19.1■□□□□ 0.65
RETREG3-212ENST00000593251 ZFP14Q9HCL3 533 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 CEP72Q9P209 647 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 TUBGCP4Q9UGJ1 667 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 RBM19Q9Y4C8 960 aaKnown RBP19.1■□□□□ 0.65
RETREG3-212ENST00000593251 PCDHGA2Q9Y5H1 932 aa19.1■□□□□ 0.65
RETREG3-212ENST00000593251 ZNF197O14709 1029 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 MYL4P12829 197 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 U2AF2P26368 475 aaKnown RBP eCLIP19.09■□□□□ 0.658e-7■■■■□ 26.3
RETREG3-212ENST00000593251 RPS9P46781 194 aaKnown RBP19.09■□□□□ 0.65
RETREG3-212ENST00000593251 SPAG1Q07617 926 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 TWF1Q12792 350 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 MTAPQ13126 283 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 RSPO4Q2I0M5 234 aaPredicted RBP19.09■□□□□ 0.65
RETREG3-212ENST00000593251 SLC10A6Q3KNW5 377 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 TPGS2Q68CL5 300 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 ZNF280DQ6N043 979 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 RNF19BQ6ZMZ0 732 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 ZBTB44Q8NCP5 570 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 DNASE1L2Q92874 299 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 ASB16Q96NS5 453 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 TRMT61BQ9BVS5 477 aaKnown RBP19.09■□□□□ 0.65
RETREG3-212ENST00000593251 ZSCAN32Q9NX65 697 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 PPP4R2Q9NY27 417 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 MRPS17Q9Y2R5 130 aaKnown RBP19.09■□□□□ 0.65
RETREG3-212ENST00000593251 STK24Q9Y6E0 443 aa19.09■□□□□ 0.65
RETREG3-212ENST00000593251 KIF26AQ9ULI4 1882 aaPredicted RBP19.08■□□□□ 0.65
RETREG3-212ENST00000593251 MOSPD3O75425 235 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 CPB1P15086 417 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 GDI1P31150 447 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 VIPR2P41587 438 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 STRN3Q13033 797 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 NOLC1Q14978 699 aaKnown RBP eCLIP19.08■□□□□ 0.64
RETREG3-212ENST00000593251 CYP4A22Q5TCH4 519 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 VITQ6UXI7 678 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 ELMOD1Q8N336 334 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 ZSCAN31Q96LW9 406 aaPredicted RBP19.08■□□□□ 0.64
RETREG3-212ENST00000593251 ZNF512Q96ME7 567 aaPredicted RBP19.08■□□□□ 0.64
RETREG3-212ENST00000593251 PLIN2Q99541 437 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 PRMT8Q9NR22 394 aaPredicted RBP19.08■□□□□ 0.64
RETREG3-212ENST00000593251 DLL3Q9NYJ7 618 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 AFF4Q9UHB7 1163 aaKnown RBP19.08■□□□□ 0.64
RETREG3-212ENST00000593251 SMG5Q9UPR3 1016 aaKnown RBP19.08■□□□□ 0.64
RETREG3-212ENST00000593251 TIMM13Q9Y5L4 95 aaPredicted RBP19.08■□□□□ 0.64
RETREG3-212ENST00000593251 F5P12259 2224 aa19.08■□□□□ 0.64
RETREG3-212ENST00000593251 NCANO14594 1321 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 LILRB5O75023 590 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 TOM1L1O75674 476 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 OR4Q2P0C623 313 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 CXCL8P10145 99 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 IQCEQ6IPM2 695 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 DTHD1Q6ZMT9 781 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 ZNF687Q8N1G0 1237 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 TMEM161BQ8NDZ6 487 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 APPL2Q8NEU8 664 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 NELL1Q92832 810 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 SMARCD2Q92925 531 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 HAPLN2Q9GZV7 340 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 C17orf75Q9HAS0 396 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 ZNF334Q9HCZ1 680 aaPredicted RBP19.07■□□□□ 0.64
RETREG3-212ENST00000593251 PCDHB8Q9UN66 801 aa19.07■□□□□ 0.64
RETREG3-212ENST00000593251 MICAL2O94851 1124 aa19.06■□□□□ 0.64
RETREG3-212ENST00000593251 GUCY2CP25092 1073 aa19.06■□□□□ 0.64
RETREG3-212ENST00000593251 MARCKSP29966 332 aaPredicted RBP19.06■□□□□ 0.64
RETREG3-212ENST00000593251 MATR3P43243 847 aaKnown RBP eCLIP19.06■□□□□ 0.64
RETREG3-212ENST00000593251 CACNB1Q02641 598 aaPredicted RBP19.06■□□□□ 0.64
RETREG3-212ENST00000593251 TEAD2Q15562 447 aa19.06■□□□□ 0.64
RETREG3-212ENST00000593251 MAP4K3Q8IVH8 894 aa19.06■□□□□ 0.64
RETREG3-212ENST00000593251 ZSCAN18Q8TBC5 510 aaPredicted RBP19.06■□□□□ 0.64
RETREG3-212ENST00000593251 IRF7Q92985 503 aa19.06■□□□□ 0.64
RETREG3-212ENST00000593251 PGLYRP2Q96PD5 576 aa19.06■□□□□ 0.64
RETREG3-212ENST00000593251 PNMA5Q96PV4 448 aa19.06■□□□□ 0.64
RETREG3-212ENST00000593251 NTPCRQ9BSD7 190 aaKnown RBP19.06■□□□□ 0.64
RETREG3-212ENST00000593251 EPC1Q9H2F5 836 aa19.06■□□□□ 0.64
RETREG3-212ENST00000593251 ASAH2Q9NR71 780 aa19.06■□□□□ 0.64
RETREG3-212ENST00000593251 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.06■□□□□ 0.64
RETREG3-212ENST00000593251 TSC2P49815 1807 aa19.06■□□□□ 0.64
RETREG3-212ENST00000593251 NUP210Q8TEM1 1887 aaPredicted RBP19.05■□□□□ 0.64
RETREG3-212ENST00000593251 NPHP3-ACAD11A0A0J9YXS1 232 aa19.05■□□□□ 0.64
RETREG3-212ENST00000593251 LAD1O00515 517 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms