RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 CEP63Q96MT8 703 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 NECAB3Q96P71 396 aaPredicted RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 CGRRF1Q99675 332 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 NAT10Q9H0A0 1025 aaKnown RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 THAP9Q9H5L6 903 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 NRDE2Q9H7Z3 1164 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 TLR9Q9NR96 1032 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 INTS13Q9NVM9 706 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 SPG21Q9NZD8 308 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 CNTN3Q9P232 1028 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 CGNQ9P2M7 1197 aaKnown RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 FRMD4BQ9Y2L6 1034 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 FNDC1Q4ZHG4 1894 aaPredicted RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 KIAA1671Q9BY89 1806 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 CITO14578 2027 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.43□□□□□ -0.74
DDX39A-220ENST00000593008 BECN2A8MW95 431 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 VNN1O95497 513 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 BMP1P13497 986 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 CA8P35219 290 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 PPM1AP35813 382 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 MTIF2P46199 727 aaKnown RBP10.43□□□□□ -0.74
DDX39A-220ENST00000593008 SLC11A1P49279 550 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 VAMP7P51809 220 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 YARSP54577 528 aaKnown RBP10.43□□□□□ -0.74
DDX39A-220ENST00000593008 RBM10P98175 930 aaKnown RBP10.43□□□□□ -0.74
DDX39A-220ENST00000593008 KRT17Q04695 432 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 MYBPC2Q14324 1141 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 AAK1Q2M2I8 961 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 XKR4Q5GH76 650 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 TCP11X2Q5H9J9 407 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 TDRD10Q5VZ19 366 aaKnown RBP10.43□□□□□ -0.74
DDX39A-220ENST00000593008 FOXR2Q6PJQ5 311 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 C3orf58Q8NDZ4 430 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 CXorf38Q8TB03 319 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 PARD3BQ8TEW8 1205 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 HASPINQ8TF76 798 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 TMEM174Q8WUU8 243 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 SEMA4DQ92854 862 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 NAP1L5Q96NT1 182 aaPredicted RBP10.43□□□□□ -0.74
DDX39A-220ENST00000593008 FAM193BQ96PV7 902 aaPredicted RBP10.43□□□□□ -0.74
DDX39A-220ENST00000593008 PPP1R10Q96QC0 940 aaKnown RBP10.43□□□□□ -0.74
DDX39A-220ENST00000593008 TCF25Q9BQ70 676 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 VPS16Q9H269 839 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 TLE6Q9H808 572 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 ENTPD7Q9NQZ7 604 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 ARMCX3Q9UH62 379 aaPredicted RBP10.43□□□□□ -0.74
DDX39A-220ENST00000593008 PUF60Q9UHX1 559 aaKnown RBP10.43□□□□□ -0.74
DDX39A-220ENST00000593008 SIX4Q9UIU6 781 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 TTC28Q96AY4 2481 aa10.43□□□□□ -0.74
DDX39A-220ENST00000593008 HIDE1A8MVS5 230 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 I3L4J1 428 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 TEX33O43247 280 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 GALTP07902 379 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 PRKCSHP14314 528 aaPredicted RBP10.42□□□□□ -0.74
DDX39A-220ENST00000593008 KCNE1P15382 129 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 TNNI1P19237 187 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 COPB1P53618 953 aaKnown RBP10.42□□□□□ -0.74
DDX39A-220ENST00000593008 MARSP56192 900 aaKnown RBP10.42□□□□□ -0.74
DDX39A-220ENST00000593008 PLCB3Q01970 1234 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 UBE3AQ05086 875 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 DLX2Q07687 328 aaPredicted RBP10.42□□□□□ -0.74
DDX39A-220ENST00000593008 TMEM132DQ14C87 1099 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 CT47A1Q5JQC4 288 aaPredicted RBP10.42□□□□□ -0.74
DDX39A-220ENST00000593008 SPOPLQ6IQ16 392 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 TMC7Q7Z402 723 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 FRMD5Q7Z6J6 570 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 HACE1Q8IYU2 909 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 C1orf127Q8N9H9 656 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 TAS1R2Q8TE23 839 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 AUTS2Q8WXX7 1259 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 PABPC5Q96DU9 382 aaKnown RBP10.42□□□□□ -0.74
DDX39A-220ENST00000593008 TMEM169Q96HH4 297 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 RPS6KC1Q96S38 1066 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 CRACR2AQ9BSW2 395 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 PI4K2AQ9BTU6 479 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 MKNK1Q9BUB5 465 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 UBN1Q9NPG3 1134 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 AJAP1Q9UKB5 411 aaPredicted RBP10.42□□□□□ -0.74
DDX39A-220ENST00000593008 GIT1Q9Y2X7 761 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 PRG3Q9Y2Y8 225 aaPredicted RBP10.42□□□□□ -0.74
DDX39A-220ENST00000593008 BRWD1Q9NSI6 2320 aa10.42□□□□□ -0.74
DDX39A-220ENST00000593008 FSCN2O14926 492 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 KIAA0391O15091 583 aaKnown RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 SPTLC1O15269 473 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 INPPL1O15357 1258 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 TBX10O75333 385 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 KIF4AO95239 1232 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 IL18RAPO95256 599 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 LDHAP00338 332 aaKnown RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 C4BPAP04003 597 aaKnown RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 ITGB3P05106 788 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 KRT13P13646 458 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 POLR2BP30876 1174 aaKnown RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 LTBRP36941 435 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 OR1G1P47890 313 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 CLCNKBP51801 687 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 FANCCQ00597 558 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 ZBTB6Q15916 424 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms