RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 NUMBLQ9Y6R0 609 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 USP34Q70CQ2 3546 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 XPOTO43592 962 aaKnown RBP25.33■■□□□ 1.65
MBD3-211ENST00000592965 ATF2P15336 505 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 AOC1P19801 751 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 SPAG1Q07617 926 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 PABPC1LQ4VXU2 614 aaKnown RBP25.33■■□□□ 1.65
MBD3-211ENST00000592965 TPGS2Q68CL5 300 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 FAM173BQ6P4H8 233 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 KRI1Q8N9T8 703 aaKnown RBP25.33■■□□□ 1.65
MBD3-211ENST00000592965 FLCNQ8NFG4 579 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 DDX12PQ92771 950 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 PHOX2BQ99453 314 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 MSTO1Q9BUK6 570 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 RPF1Q9H9Y2 349 aaKnown RBP25.33■■□□□ 1.65
MBD3-211ENST00000592965 HCFC1R1Q9NWW0 138 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 DNMT3BQ9UBC3 853 aaKnown RBP25.33■■□□□ 1.65
MBD3-211ENST00000592965 MTMR6Q9Y217 621 aa25.33■■□□□ 1.65
MBD3-211ENST00000592965 LACTBL1A8MY62 500 aa25.32■■□□□ 1.64
MBD3-211ENST00000592965 M0QZQ0 153 aa25.32■■□□□ 1.64
MBD3-211ENST00000592965 CFHP08603 1231 aa25.32■■□□□ 1.64
MBD3-211ENST00000592965 NMT1P30419 496 aaKnown RBP25.32■■□□□ 1.64
MBD3-211ENST00000592965 TXLNAP40222 546 aa25.32■■□□□ 1.64
MBD3-211ENST00000592965 AARSP49588 968 aaKnown RBP eCLIP25.32■■□□□ 1.64
MBD3-211ENST00000592965 CTXN3Q4LDR2 81 aa25.32■■□□□ 1.64
MBD3-211ENST00000592965 TCEAL8Q8IYN2 117 aa25.32■■□□□ 1.64
MBD3-211ENST00000592965 ITFG1Q8TB96 612 aa25.32■■□□□ 1.64
MBD3-211ENST00000592965 AVENQ9NQS1 362 aaPredicted RBP25.32■■□□□ 1.64
MBD3-211ENST00000592965 SLC2A4RGQ9NR83 387 aa25.32■■□□□ 1.64
MBD3-211ENST00000592965 VPS13AQ96RL7 3174 aa25.32■■□□□ 1.64
MBD3-211ENST00000592965 K7ELQ4 463 aaPredicted RBP25.31■■□□□ 1.64
MBD3-211ENST00000592965 PRRG1O14668 218 aa25.31■■□□□ 1.64
MBD3-211ENST00000592965 ELF1P32519 619 aa25.31■■□□□ 1.64
MBD3-211ENST00000592965 MTSS1LQ765P7 747 aa25.31■■□□□ 1.64
MBD3-211ENST00000592965 CD302Q8IX05 232 aa25.31■■□□□ 1.64
MBD3-211ENST00000592965 NPAS3Q8IXF0 933 aa25.31■■□□□ 1.64
MBD3-211ENST00000592965 CLIC6Q96NY7 704 aa25.31■■□□□ 1.64
MBD3-211ENST00000592965 CPSF3Q9UKF6 684 aaKnown RBP25.31■■□□□ 1.64
MBD3-211ENST00000592965 MAFFQ9ULX9 164 aa25.31■■□□□ 1.64
MBD3-211ENST00000592965 KRBA1A5PL33 1030 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 LRG1P02750 347 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 ARPP19P56211 112 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 RRAGBQ5VZM2 374 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 PARM1Q6UWI2 310 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 TMEM130Q8N3G9 435 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 FGF14Q92915 247 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 HVCN1Q96D96 273 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 USP28Q96RU2 1077 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 RTP3Q9BQQ7 232 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 ZSCAN16Q9H4T2 348 aaPredicted RBP25.3■■□□□ 1.64
MBD3-211ENST00000592965 SEL1LQ9UBV2 794 aa25.3■■□□□ 1.64
MBD3-211ENST00000592965 PPP1R37O75864 691 aa25.29■■□□□ 1.64
MBD3-211ENST00000592965 OAZ2O95190 189 aa25.29■■□□□ 1.64
MBD3-211ENST00000592965 RHOP08100 348 aa25.29■■□□□ 1.64
MBD3-211ENST00000592965 CEBPZQ03701 1054 aaKnown RBP25.29■■□□□ 1.64
MBD3-211ENST00000592965 SLC39A14Q15043 492 aa25.29■■□□□ 1.64
MBD3-211ENST00000592965 ZC2HC1CQ53FD0 456 aaPredicted RBP25.29■■□□□ 1.64
MBD3-211ENST00000592965 SPATA1Q5VX52 437 aa25.29■■□□□ 1.64
MBD3-211ENST00000592965 SFR1Q86XK3 245 aa25.29■■□□□ 1.64
MBD3-211ENST00000592965 GPR152Q8TDT2 470 aa25.29■■□□□ 1.64
MBD3-211ENST00000592965 ATOH1Q92858 354 aaPredicted RBP25.29■■□□□ 1.64
MBD3-211ENST00000592965 OXCT2Q9BYC2 517 aaPredicted RBP25.29■■□□□ 1.64
MBD3-211ENST00000592965 CYP4F11Q9HBI6 524 aa25.29■■□□□ 1.64
MBD3-211ENST00000592965 AFF4Q9UHB7 1163 aaKnown RBP25.29■■□□□ 1.64
MBD3-211ENST00000592965 MRPS23Q9Y3D9 190 aaKnown RBP25.29■■□□□ 1.64
MBD3-211ENST00000592965 INSL5Q9Y5Q6 135 aa25.29■■□□□ 1.64
MBD3-211ENST00000592965 STYXL1Q9Y6J8 313 aa25.29■■□□□ 1.64
MBD3-211ENST00000592965 RIF1Q5UIP0 2472 aaKnown RBP25.28■■□□□ 1.64
MBD3-211ENST00000592965 TSC2P49815 1807 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 ANKRD63C9JTQ0 380 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 H0Y858 1186 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 STX6O43752 255 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 SEC24AO95486 1093 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 GUCY2FP51841 1108 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 SLFN12LQ6IEE8 588 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 CCDC73Q6ZRK6 1079 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 SV2BQ7L1I2 683 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 DYMQ7RTS9 669 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 ZNF720Q7Z2F6 126 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 RPP25Q9BUL9 199 aaKnown RBP25.28■■□□□ 1.64
MBD3-211ENST00000592965 ARHGEF3Q9NR81 526 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 FAM86C1Q9NVL1 165 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 GDE1Q9NZC3 331 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 CA14Q9ULX7 337 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 DERAQ9Y315 318 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 MYO15AQ9UKN7 3530 aa25.28■■□□□ 1.64
MBD3-211ENST00000592965 SCN1AP35498 2009 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 MYMKA6NI61 221 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 PI15O43692 258 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 GAP43P17677 238 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 PTPN2P17706 415 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 PAX3P23760 479 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 YWHAHQ04917 246 aaPredicted RBP25.27■■□□□ 1.64
MBD3-211ENST00000592965 SLC5A9Q2M3M2 681 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 JADE1Q6IE81 842 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 CCDC105Q8IYK2 499 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 ST13P5Q8NFI4 369 aaPredicted RBP25.27■■□□□ 1.64
MBD3-211ENST00000592965 BEST2Q8NFU1 509 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 DNAJC19Q96DA6 116 aa25.27■■□□□ 1.64
MBD3-211ENST00000592965 STRA6Q9BX79 667 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms