RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 MARSP56192 900 aaKnown RBP12.89□□□□□ -0.35
DDX39A-219ENST00000592927 OSTNP61366 133 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 ADAM9Q13443 819 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 NR1I3Q14994 352 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 KRT31Q15323 416 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 AGMOQ6ZNB7 445 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 LRRC55Q6ZSA7 311 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 APTXQ7Z2E3 356 aaKnown RBP12.89□□□□□ -0.35
DDX39A-219ENST00000592927 SLC9A9Q8IVB4 645 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 C12orf56Q8IXR9 622 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 FIBCD1Q8N539 461 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 ACAP3Q96P50 834 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 CBWD1Q9BRT8 395 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 C11orf84Q9BUA3 381 aaPredicted RBP12.89□□□□□ -0.35
DDX39A-219ENST00000592927 PCIF1Q9H4Z3 704 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 RSAD1Q9HA92 442 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 AGPAT3Q9NRZ7 376 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 IMPACTQ9P2X3 320 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 GIT1Q9Y2X7 761 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 MICAL3Q7RTP6 2002 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
DDX39A-219ENST00000592927 CLIC2O15247 247 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 OFD1O75665 1012 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 RECQL4O94761 1208 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 CLTAP09496 248 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 NR2F2P24468 414 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 MTIF2P46199 727 aaKnown RBP12.88□□□□□ -0.35
DDX39A-219ENST00000592927 PPP2R3AQ06190 1150 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 SEZ6Q53EL9 994 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 HSP90AA4PQ58FG1 418 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 CLLU1OSQ5K130 101 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 CEP120Q8N960 986 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 URGCPQ8TCY9 931 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 HELQQ8TDG4 1101 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 RSPH1Q8WYR4 309 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 TRIM44Q96DX7 344 aaPredicted RBP12.88□□□□□ -0.35
DDX39A-219ENST00000592927 NAP1L5Q96NT1 182 aaPredicted RBP12.88□□□□□ -0.35
DDX39A-219ENST00000592927 MKNK1Q9BUB5 465 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 TMEM117Q9H0C3 514 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 METTL14Q9HCE5 456 aaKnown RBP12.88□□□□□ -0.35
DDX39A-219ENST00000592927 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
DDX39A-219ENST00000592927 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
DDX39A-219ENST00000592927 RNF19AQ9NV58 838 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 KLK14Q9P0G3 267 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 INPP5FQ9Y2H2 1132 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 NCOR2Q9Y618 2525 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 GVINP1Q7Z2Y8 2422 aa12.88□□□□□ -0.35
DDX39A-219ENST00000592927 ARL5CA6NH57 179 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 EXTL3O43909 919 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 LDHAP00338 332 aaKnown RBP12.87□□□□□ -0.35
DDX39A-219ENST00000592927 NR3C1P04150 777 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 PTMAP06454 111 aaKnown RBP12.87□□□□□ -0.35
DDX39A-219ENST00000592927 MLH1P40692 756 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 ACOT2P49753 483 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 GATMP50440 423 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 CYP2J2P51589 502 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 BTG3Q14201 252 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-219ENST00000592927 HSP90AA2PQ14568 343 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-219ENST00000592927 MAN2A1Q16706 1144 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 PAN2Q504Q3 1202 aaKnown RBP12.87□□□□□ -0.35
DDX39A-219ENST00000592927 NOMO2Q5JPE7 1267 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 ZNF689Q96CS4 500 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-219ENST00000592927 SAAL1Q96ER3 474 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 CASD1Q96PB1 797 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 RPS6KC1Q96S38 1066 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 GAD1Q99259 594 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 FAM213AQ9BRX8 229 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 TUBGCP2Q9BSJ2 902 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 RPF1Q9H9Y2 349 aaKnown RBP12.87□□□□□ -0.35
DDX39A-219ENST00000592927 KIAA1586Q9HCI6 787 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 HSPBP1Q9NZL4 362 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 BARX2Q9UMQ3 279 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-219ENST00000592927 PCDHGC5Q9Y5F6 944 aa12.87□□□□□ -0.35
DDX39A-219ENST00000592927 TTC3P53804 2025 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 GOLGA8IPA6NC78 632 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 GOLGA8JA6NMD2 632 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-219ENST00000592927 FAM189A1O60320 539 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 EPB41P11171 864 aaKnown RBP12.86□□□□□ -0.35
DDX39A-219ENST00000592927 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
DDX39A-219ENST00000592927 TNFSF9P41273 254 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 GSDMDP57764 484 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 CAMK1Q14012 370 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 COL9A2Q14055 689 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-219ENST00000592927 ST3GAL2Q16842 350 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 CCDC40Q4G0X9 1142 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 ZBTB41Q5SVQ8 909 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 ADGRD2Q7Z7M1 963 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 CMTR2Q8IYT2 770 aaKnown RBP12.86□□□□□ -0.35
DDX39A-219ENST00000592927 GPD1LQ8N335 351 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 EFHBQ8N7U6 833 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 ZFP42Q96MM3 310 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 MRPL9Q9BYD2 267 aaKnown RBP12.86□□□□□ -0.35
DDX39A-219ENST00000592927 VPS16Q9H269 839 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 RC3H2Q9HBD1 1191 aaKnown RBP12.86□□□□□ -0.35
DDX39A-219ENST00000592927 DMAC2Q9NW81 257 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 KANSL3Q9P2N6 904 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms