RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ITFG2Q969R8 447 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 GPRC5CQ9NQ84 441 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 UMODL1Q5DID0 1318 aa15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 PRPF4O43172 522 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 ZC3H11AO75152 810 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 ECM2O94769 699 aaPredicted RBP15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 KRT5P13647 590 aa15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 ENPEPQ07075 957 aa15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 ANKS1BQ7Z6G8 1248 aa15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 FAM160B2Q86V87 743 aa15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 C4orf19Q8IY42 314 aa15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 MYLK2Q9H1R3 596 aa15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.77■□□□□ 0.123e-6■■■■■ 29.3
SMARCA4-219ENST00000592604 AGO4Q9HCK5 861 aaKnown RBP15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 TOPORSQ9NS56 1045 aaPredicted RBP15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 PKD2L1Q9P0L9 805 aa15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 USH1CQ9Y6N9 552 aa15.77■□□□□ 0.12
SMARCA4-219ENST00000592604 FDX1P10109 184 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 GCAP28676 217 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 SPP2Q13103 211 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 MOGSQ13724 837 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 USP37Q86T82 979 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 KATNAL2Q8IYT4 538 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 OGFOD1Q8N543 542 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 CFAP57Q96MR6 1250 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 TMEM237Q96Q45 408 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 RBM15Q96T37 977 aaKnown RBP eCLIP15.77■□□□□ 0.112e-6■■■■□ 21.5
SMARCA4-219ENST00000592604 HEMGNQ9BXL5 484 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 OSBPL8Q9BZF1 889 aa15.77■□□□□ 0.11
SMARCA4-219ENST00000592604 LIN7AO14910 233 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 CYP1A1P04798 512 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 SETDB1Q15047 1291 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 TMED2Q15363 201 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 ZC3H12AQ5D1E8 599 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 ANKRD20A2Q5SQ80 823 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 ANKRD20A1Q5TYW2 823 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 ANKRD20A3Q5VUR7 823 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 RHOT1Q8IXI2 618 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 AGGF1Q8N302 714 aaeCLIP15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 PCDHB2Q9Y5E7 798 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 UBIAD1Q9Y5Z9 338 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 RGPD3A6NKT7 1758 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 RGPD4Q7Z3J3 1758 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 ASTN2O75129 1339 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 CYP24A1Q07973 514 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 ADCY1Q08828 1119 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 CCDC142Q17RM4 750 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 TKFCQ3LXA3 575 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 FAM47EQ6ZV65 393 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 CPA5Q8WXQ8 436 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 INPP5DQ92835 1189 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 SH2D3AQ9BRG2 576 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 PHTF1Q9UMS5 762 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 CHKBQ9Y259 395 aa15.76■□□□□ 0.11
SMARCA4-219ENST00000592604 GSTTP1A0A1W2PQM5 241 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 CALCAP01258 141 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 SLC27A3Q5K4L6 730 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 CC2D2BQ6DHV5 1058 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 MON1BQ7L1V2 547 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 EXD1Q8NHP7 514 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 TTC25Q96NG3 672 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 COL20A1Q9P218 1284 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 USP21Q9UK80 565 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 ECE2O60344 883 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 TOM1O60784 492 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 CALRP27797 417 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 SPARCL1Q14515 664 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 AOC3Q16853 763 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 SPDYAQ5MJ70 313 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 VSIG1Q86XK7 387 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 IL31RAQ8NI17 732 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 ERP27Q96DN0 273 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 PRMT6Q96LA8 375 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 LRRC37BQ96QE4 947 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 SENP1Q9P0U3 644 aa15.75■□□□□ 0.11
SMARCA4-219ENST00000592604 EXOC1LA0A1B0GW35 172 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 TMEM150BA6NC51 233 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 GNAZP19086 355 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 NSFP46459 744 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 NPTX2P47972 431 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 TAS2R40P59535 323 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 BPIFB4P59827 614 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 PDK4Q16654 411 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 P3H1Q32P28 736 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 FAM102BQ5T8I3 360 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 SLC39A4Q6P5W5 647 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 C15orf39Q6ZRI6 1047 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 PRUNE1Q86TP1 453 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 ELMO3Q96BJ8 720 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 KIAA1586Q9HCI6 787 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 ANKEF1Q9NU02 776 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 TBC1D22BQ9NU19 505 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 FEM1BQ9UK73 627 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 SMG5Q9UPR3 1016 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 E7ENQ6 273 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 HGSO14964 777 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 NEBLO76041 1014 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 DNAJC3Q13217 504 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 UGCGQ16739 394 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms