RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 ZBTB45Q96K62 511 aaPredicted RBP20.02■□□□□ 0.8
CIRBP-238ENST00000592412 SUSD3Q96L08 255 aa20.02■□□□□ 0.8
CIRBP-238ENST00000592412 RUSC1Q9BVN2 902 aa20.02■□□□□ 0.8
CIRBP-238ENST00000592412 TRMT61BQ9BVS5 477 aaKnown RBP20.02■□□□□ 0.8
CIRBP-238ENST00000592412 MRPL4Q9BYD3 311 aaKnown RBP20.02■□□□□ 0.8
CIRBP-238ENST00000592412 FOXP1Q9H334 677 aaPredicted RBP20.02■□□□□ 0.8
CIRBP-238ENST00000592412 ZNF334Q9HCZ1 680 aaPredicted RBP20.02■□□□□ 0.8
CIRBP-238ENST00000592412 LRWD1Q9UFC0 647 aa20.02■□□□□ 0.8
CIRBP-238ENST00000592412 PDCD11Q14690 1871 aaKnown RBP20.02■□□□□ 0.8
CIRBP-238ENST00000592412 ARNTLO00327 626 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 VNN2O95498 520 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 MCF2P10911 925 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 GJA1P17302 382 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 VIPR2P41587 438 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 EPHA5P54756 1037 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 CTXN3Q4LDR2 81 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 MAMSTRQ6ZN01 415 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 PDZD4Q76G19 769 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-238ENST00000592412 APBB1IPQ7Z5R6 666 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-238ENST00000592412 SMARCD2Q92925 531 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 C8orf76Q96K31 380 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 CNTNAP3BQ96NU0 1288 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 CNTNAP3Q9BZ76 1288 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 TRPV5Q9NQA5 729 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 CITO14578 2027 aa20.01■□□□□ 0.79
CIRBP-238ENST00000592412 PP2D1A8MPX8 630 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 H7C4K7 107 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 MAN2B1O00754 1011 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 ZNF197O14709 1029 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 GDI1P31150 447 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 RPL9P32969 192 aaKnown RBP20■□□□□ 0.79
CIRBP-238ENST00000592412 TWF1Q12792 350 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 GAS6Q14393 721 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 MPZL3Q6UWV2 235 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 KCNK18Q7Z418 384 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 GPR161Q8N6U8 529 aaKnown RBP20■□□□□ 0.79
CIRBP-238ENST00000592412 FBXO18Q8NFZ0 1043 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 SNX29Q8TEQ0 813 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 IRF7Q92985 503 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 RSPRY1Q96DX4 576 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 TBC1D32Q96NH3 1257 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 ACAP3Q96P50 834 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 FAM126AQ9BYI3 521 aaPredicted RBP20■□□□□ 0.79
CIRBP-238ENST00000592412 TRPV4Q9HBA0 871 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 TUBGCP4Q9UGJ1 667 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 AFF4Q9UHB7 1163 aaKnown RBP20■□□□□ 0.79
CIRBP-238ENST00000592412 NUB1Q9Y5A7 615 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 PIAS3Q9Y6X2 628 aa20■□□□□ 0.79
CIRBP-238ENST00000592412 PSMC3P17980 439 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 TOB1P50616 345 aaPredicted RBP19.99■□□□□ 0.79
CIRBP-238ENST00000592412 PDIA5Q14554 519 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 IL17AQ16552 155 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 SLC10A6Q3KNW5 377 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 SEZ6Q53EL9 994 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 WDR44Q5JSH3 913 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 ZNF280DQ6N043 979 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 RINT1Q6NUQ1 792 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 RNF19BQ6ZMZ0 732 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 C1orf186Q6ZWK4 172 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 CCDC83Q8IWF9 413 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 DDX12PQ92771 950 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 MMTAG2Q9BU76 263 aaKnown RBP19.99■□□□□ 0.79
CIRBP-238ENST00000592412 LRRC3Q9BY71 257 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 KMT5AQ9NQR1 393 aa19.99■□□□□ 0.79
CIRBP-238ENST00000592412 CHRNB1P11230 501 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 HARSP12081 509 aaKnown RBP19.98■□□□□ 0.79
CIRBP-238ENST00000592412 CDC25AP30304 524 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 TRAPPC10P48553 1259 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 LMNB2Q03252 620 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 DMP1Q13316 513 aaPredicted RBP19.98■□□□□ 0.79
CIRBP-238ENST00000592412 TEAD2Q15562 447 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 LPAL2Q16609 132 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 CYP4A22Q5TCH4 519 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 BEST2Q8NFU1 509 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 SHKBP1Q8TBC3 707 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 ZSCAN18Q8TBC5 510 aaPredicted RBP19.98■□□□□ 0.79
CIRBP-238ENST00000592412 FAM3CQ92520 227 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 HAPLN2Q9GZV7 340 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 CRISPLD1Q9H336 500 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 LMAN1LQ9HAT1 526 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 USP18Q9UMW8 372 aa19.98■□□□□ 0.79
CIRBP-238ENST00000592412 SFI1A8K8P3 1242 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 PRR5-ARHGAP8B1AHC4 643 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 SLC16A4O15374 487 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 MYL4P12829 197 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 MCM4P33991 863 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 ARHGAP8P85298 464 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 SATB1Q01826 763 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 PTGDRQ13258 359 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 TMC8Q8IU68 726 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 MFSD6LQ8IWD5 586 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 DEPDC1BQ8WUY9 529 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 SECISBP2LQ93073 1101 aaKnown RBP19.97■□□□□ 0.79
CIRBP-238ENST00000592412 ZNF512Q96ME7 567 aaPredicted RBP19.97■□□□□ 0.79
CIRBP-238ENST00000592412 NTPCRQ9BSD7 190 aaKnown RBP19.97■□□□□ 0.79
CIRBP-238ENST00000592412 TCHPQ9BT92 498 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 DNAJC25Q9H1X3 360 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 PCDHB8Q9UN66 801 aa19.97■□□□□ 0.79
CIRBP-238ENST00000592412 RBM19Q9Y4C8 960 aaKnown RBP19.97■□□□□ 0.79
CIRBP-238ENST00000592412 YIPF1Q9Y548 306 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms