RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 MOSPD3O75425 235 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 GJA1P17302 382 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 FNTBP49356 437 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 KPNA1P52294 538 aaPredicted RBP10.04□□□□□ -0.8
APOC1-207ENST00000592176 MLLT6P55198 1093 aaPredicted RBP10.04□□□□□ -0.8
APOC1-207ENST00000592176 OSTNP61366 133 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 SATB1Q01826 763 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 SOX4Q06945 474 aaPredicted RBP10.04□□□□□ -0.8
APOC1-207ENST00000592176 TWF1Q12792 350 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 GAS6Q14393 721 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 CSRP2Q16527 193 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 YAF2Q8IY57 180 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 SPEM1Q8N4L4 309 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 LEMD2Q8NC56 503 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 APPL2Q8NEU8 664 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 ZSCAN18Q8TBC5 510 aaPredicted RBP10.04□□□□□ -0.8
APOC1-207ENST00000592176 KIFAP3Q92845 792 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 ZMAT2Q96NC0 199 aaKnown RBP10.04□□□□□ -0.8
APOC1-207ENST00000592176 ACAP3Q96P50 834 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 ACO2Q99798 780 aaKnown RBP10.04□□□□□ -0.8
APOC1-207ENST00000592176 TCHPQ9BT92 498 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 C8orf33Q9H7E9 229 aaPredicted RBP10.04□□□□□ -0.8
APOC1-207ENST00000592176 CEP72Q9P209 647 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 AFF4Q9UHB7 1163 aaKnown RBP10.04□□□□□ -0.8
APOC1-207ENST00000592176 FANCMQ8IYD8 2048 aa10.04□□□□□ -0.8
APOC1-207ENST00000592176 CCDC169A6NNP5 214 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 FOXD2O60548 495 aaPredicted RBP10.03□□□□□ -0.8
APOC1-207ENST00000592176 KCNE1P15382 129 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 MUTP22033 750 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 FOSBP53539 338 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 DMWDQ09019 674 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 PTGDRQ13258 359 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 LRRC32Q14392 662 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 ZNF174Q15697 407 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 C1orf228Q6PIY5 440 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 PRR23CQ6ZRP0 262 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 CEP68Q76N32 757 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.03□□□□□ -0.8
APOC1-207ENST00000592176 LONP2Q86WA8 852 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 CEP120Q8N960 986 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 DDX1Q92499 740 aaKnown RBP10.03□□□□□ -0.8
APOC1-207ENST00000592176 DOCK6Q96HP0 2047 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 SUSD3Q96L08 255 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 CDT1Q9H211 546 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 BHMT2Q9H2M3 363 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 SLITRK6Q9H5Y7 841 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 TMEM134Q9H6X4 195 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 PTPRHQ9HD43 1115 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 ASAH2Q9NR71 780 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 MYH15Q9Y2K3 1946 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 CEP250Q9BV73 2442 aa10.03□□□□□ -0.8
APOC1-207ENST00000592176 CHADO15335 359 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 GDF9O60383 454 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 MCF2P10911 925 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 CPB1P15086 417 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 KCNA4P22459 653 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 CCT6AP40227 531 aaKnown RBP10.02□□□□□ -0.81
APOC1-207ENST00000592176 EPHA5P54756 1037 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 PEX3P56589 373 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 SRSF5Q13243 272 aaKnown RBP10.02□□□□□ -0.81
APOC1-207ENST00000592176 SAFBQ15424 915 aaKnown RBP eCLIP10.02□□□□□ -0.81
APOC1-207ENST00000592176 TEAD2Q15562 447 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 ECM1Q16610 540 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 ME3Q16798 604 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 ZNF568Q3ZCX4 644 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 DGKKQ5KSL6 1271 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 HEATR6Q6AI08 1181 aaKnown RBP10.02□□□□□ -0.81
APOC1-207ENST00000592176 ZNF280DQ6N043 979 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 RNF19BQ6ZMZ0 732 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 GPIHBP1Q8IV16 184 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 SHKBP1Q8TBC3 707 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 DDX12PQ92771 950 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 C18orf25Q96B23 403 aaPredicted RBP10.02□□□□□ -0.81
APOC1-207ENST00000592176 MSANTD3Q96H12 275 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 TBC1D32Q96NH3 1257 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 TARS2Q9BW92 718 aaKnown RBP10.02□□□□□ -0.81
APOC1-207ENST00000592176 MRPL4Q9BYD3 311 aaKnown RBP10.02□□□□□ -0.81
APOC1-207ENST00000592176 RBM12Q9NTZ6 932 aaKnown RBP10.02□□□□□ -0.81
APOC1-207ENST00000592176 KIAA1024Q9UPX6 916 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 RBM19Q9Y4C8 960 aaKnown RBP10.02□□□□□ -0.81
APOC1-207ENST00000592176 ARID2Q68CP9 1835 aa10.02□□□□□ -0.81
APOC1-207ENST00000592176 MIA3Q5JRA6 1907 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 NOTCH4Q99466 2003 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 SLC38A8A6NNN8 435 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 K7ESF4 209 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 ARNTLO00327 626 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 DPYSL4O14531 572 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 AXIN1O15169 862 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 PAPSS2O95340 614 aaPredicted RBP10.01□□□□□ -0.81
APOC1-207ENST00000592176 OR52Z1P0C646 297 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 MCM4P33991 863 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 NPTX2P47972 431 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 SOX9P48436 509 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 EPHB3P54753 998 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 PDIA5Q14554 519 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 HAUS3Q68CZ6 603 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 IL31Q6EBC2 164 aa10.01□□□□□ -0.81
APOC1-207ENST00000592176 RALGPS2Q86X27 583 aaPredicted RBP10.01□□□□□ -0.81
APOC1-207ENST00000592176 ARID3BQ8IVW6 561 aaPredicted RBP10.01□□□□□ -0.81
APOC1-207ENST00000592176 FAM160A2Q8N612 972 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms