RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 ZMAT2Q96NC0 199 aaKnown RBP17.45■□□□□ 0.38
DDX39A-216ENST00000591275 CCDC94Q9BW85 323 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-216ENST00000591275 CDT1Q9H211 546 aa17.45■□□□□ 0.38
DDX39A-216ENST00000591275 TOPORSQ9NS56 1045 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-216ENST00000591275 CEP72Q9P209 647 aa17.45■□□□□ 0.38
DDX39A-216ENST00000591275 TNFSF13BQ9Y275 285 aa17.45■□□□□ 0.38
DDX39A-216ENST00000591275 NUB1Q9Y5A7 615 aa17.45■□□□□ 0.38
DDX39A-216ENST00000591275 CHURC1-FNTBB4DL54 471 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 H7C4K7 107 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 SLC30A4O14863 429 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 ZNF263O14978 683 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 SYN3O14994 580 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 MICAL2O94851 1124 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 RETP07949 1114 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 GRM5P41594 1212 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 CXCL12P48061 93 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 FNTBP49356 437 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 TWF1Q12792 350 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 TRIM29Q14134 588 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 SIM2Q14190 667 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-216ENST00000591275 GAS6Q14393 721 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 ME3Q16798 604 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 ST3GAL2Q16842 350 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 ZNF568Q3ZCX4 644 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 IQCEQ6IPM2 695 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 ALKAL1Q6UXT8 129 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 NSUN7Q8NE18 718 aaKnown RBP17.44■□□□□ 0.38
DDX39A-216ENST00000591275 ERMNQ8TAM6 284 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 ZSCAN18Q8TBC5 510 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-216ENST00000591275 NETO1Q8TDF5 533 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 C18orf25Q96B23 403 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-216ENST00000591275 ZNF512Q96ME7 567 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-216ENST00000591275 IER2Q9BTL4 223 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 SLITRK6Q9H5Y7 841 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 SLC38A7Q9NVC3 462 aa17.44■□□□□ 0.38
DDX39A-216ENST00000591275 CCDC169A6NNP5 214 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 HRO43593 1189 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 CHRNB1P11230 501 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 KCNA4P22459 653 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 GUCY1B3Q02153 619 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 MRPL58Q14197 206 aaKnown RBP17.43■□□□□ 0.38
DDX39A-216ENST00000591275 TEAD2Q15562 447 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 ZNF174Q15697 407 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 ECM1Q16610 540 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 XKR4Q5GH76 650 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 TPGS2Q68CL5 300 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 HEATR6Q6AI08 1181 aaKnown RBP17.43■□□□□ 0.38
DDX39A-216ENST00000591275 DEPDC1BQ8WUY9 529 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 KIFAP3Q92845 792 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 GTF3C6Q969F1 213 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 ACO2Q99798 780 aaKnown RBP17.43■□□□□ 0.38
DDX39A-216ENST00000591275 BHMT2Q9H2M3 363 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 TRPV5Q9NQA5 729 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 SEMA4GQ9NTN9 838 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 RBM12Q9NTZ6 932 aaKnown RBP17.43■□□□□ 0.38
DDX39A-216ENST00000591275 ZFHX4Q86UP3 3567 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 CITO14578 2027 aa17.43■□□□□ 0.38
DDX39A-216ENST00000591275 PDCD11Q14690 1871 aaKnown RBP17.42■□□□□ 0.38
DDX39A-216ENST00000591275 HEPACAM2A8MVW5 462 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 GDF9O60383 454 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 OR52Z1P0C646 297 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 HARSP12081 509 aaKnown RBP17.42■□□□□ 0.38
DDX39A-216ENST00000591275 CPB1P15086 417 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 MCM4P33991 863 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 SOX9P48436 509 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 ANKRD1Q15327 319 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 RNF19BQ6ZMZ0 732 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 PRR23CQ6ZRP0 262 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-216ENST00000591275 GPIHBP1Q8IV16 184 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 MFSD6LQ8IWD5 586 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 TMEM130Q8N3G9 435 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 RSPRY1Q96DX4 576 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 CHAMP1Q96JM3 812 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 TARS2Q9BW92 718 aaKnown RBP17.42■□□□□ 0.38
DDX39A-216ENST00000591275 ASAH2Q9NR71 780 aa17.42■□□□□ 0.38
DDX39A-216ENST00000591275 SLC38A8A6NNN8 435 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 ARNTLO00327 626 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 MEFVO15553 781 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-216ENST00000591275 LRP3O75074 770 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 KCNE1P15382 129 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 HOXC13P31276 330 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 CCT6AP40227 531 aaKnown RBP17.41■□□□□ 0.38
DDX39A-216ENST00000591275 PEX3P56589 373 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 ZNF280DQ6N043 979 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 Q6ZS52 159 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 SPEM1Q8N4L4 309 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 TTC8Q8TAM2 541 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 SHKBP1Q8TBC3 707 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 CSGALNACT1Q8TDX6 532 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 SUSD3Q96L08 255 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 TBC1D32Q96NH3 1257 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 ACAP3Q96P50 834 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 TCHPQ9BT92 498 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 PTPRHQ9HD43 1115 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 AFF4Q9UHB7 1163 aaKnown RBP17.41■□□□□ 0.38
DDX39A-216ENST00000591275 PHLPP2Q6ZVD8 1323 aa17.41■□□□□ 0.38
DDX39A-216ENST00000591275 RPL9P32969 192 aaKnown RBP17.4■□□□□ 0.38
DDX39A-216ENST00000591275 NPTX2P47972 431 aa17.4■□□□□ 0.38
DDX39A-216ENST00000591275 KPNA1P52294 538 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms