RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 HFE2Q6ZVN8 426 aa17.96■□□□□ 0.47
GCDH-213ENST00000590627 USP37Q86T82 979 aa17.96■□□□□ 0.47
GCDH-213ENST00000590627 PARD3BQ8TEW8 1205 aa17.96■□□□□ 0.47
GCDH-213ENST00000590627 EDAQ92838 391 aa17.96■□□□□ 0.47
GCDH-213ENST00000590627 TUBGCP2Q9BSJ2 902 aa17.96■□□□□ 0.47
GCDH-213ENST00000590627 NXF3Q9H4D5 531 aaKnown RBP17.96■□□□□ 0.47
GCDH-213ENST00000590627 RPF1Q9H9Y2 349 aaKnown RBP17.96■□□□□ 0.47
GCDH-213ENST00000590627 GRPEL1Q9HAV7 217 aa17.96■□□□□ 0.47
GCDH-213ENST00000590627 USP15Q9Y4E8 981 aaPredicted RBP17.96■□□□□ 0.47
GCDH-213ENST00000590627 PCDHGC5Q9Y5F6 944 aa17.96■□□□□ 0.47
GCDH-213ENST00000590627 TECTAO75443 2155 aa17.96■□□□□ 0.46
GCDH-213ENST00000590627 FSCN2O14926 492 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 IL18RAPO95256 599 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 FGFR1P11362 822 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 ATF7P17544 494 aaPredicted RBP17.95■□□□□ 0.46
GCDH-213ENST00000590627 VAMP7P51809 220 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 OSTNP61366 133 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 FANCCQ00597 558 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 SURF1Q15526 300 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 MAN2A1Q16706 1144 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 DUSP6Q16828 381 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 SLC10A6Q3KNW5 377 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 BMP8AQ7Z5Y6 402 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 ZNF598Q86UK7 904 aaKnown RBP17.95■□□□□ 0.46
GCDH-213ENST00000590627 CD302Q8IX05 232 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 HACE1Q8IYU2 909 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 PLEKHO2Q8TD55 490 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 SLC35C1Q96A29 364 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 PHF7Q9BWX1 381 aaPredicted RBP17.95■□□□□ 0.46
GCDH-213ENST00000590627 ASB7Q9H672 318 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 SNTG2Q9NY99 539 aa17.95■□□□□ 0.46
GCDH-213ENST00000590627 PUF60Q9UHX1 559 aaKnown RBP17.95■□□□□ 0.46
GCDH-213ENST00000590627 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.95■□□□□ 0.46
GCDH-213ENST00000590627 TTC26A0AVF1 554 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 PER2O15055 1255 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 MEFVO15553 781 aaPredicted RBP17.94■□□□□ 0.46
GCDH-213ENST00000590627 EOMESO95936 686 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 SRGAP2BP0DMP2 458 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 CXCL8P10145 99 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 PRKCSHP14314 528 aaPredicted RBP17.94■□□□□ 0.46
GCDH-213ENST00000590627 GTF2H1P32780 548 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 PPM1AP35813 382 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 MRE11P49959 708 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 COPB1P53618 953 aaKnown RBP17.94■□□□□ 0.46
GCDH-213ENST00000590627 XKR4Q5GH76 650 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 MIIPQ5JXC2 388 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 C1orf220Q5T0J3 134 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 ALKAL1Q6UXT8 129 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 TMEM184AQ6ZMB5 413 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 ECHDC2Q86YB7 292 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 CREBRFQ8IUR6 639 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 CASD1Q96PB1 797 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 TSPAN18Q96SJ8 248 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 RNF39Q9H2S5 420 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 TOPORSQ9NS56 1045 aaPredicted RBP17.94■□□□□ 0.46
GCDH-213ENST00000590627 TAB2Q9NYJ8 693 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 HCSTQ9UBK5 93 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 HES2Q9Y543 173 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 WDFY4Q6ZS81 3184 aa17.94■□□□□ 0.46
GCDH-213ENST00000590627 A0A1B0GTH6 734 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 STX10O60499 249 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 RECQL4O94761 1208 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 SERPINC1P01008 464 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 TPM2P07951 284 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 YARSP54577 528 aaKnown RBP17.93■□□□□ 0.46
GCDH-213ENST00000590627 WNT7BP56706 349 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 KCNC3Q14003 757 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 VWA3BQ502W6 1294 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 KCNT2Q6UVM3 1135 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 ABI1Q8IZP0 508 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 LRRC43Q8N309 656 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 SUSD6Q92537 303 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 CCDC127Q96BQ5 260 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 PGBD4Q96DM1 585 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 SNX27Q96L92 541 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 PDE11AQ9HCR9 933 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 NGRNQ9NPE2 291 aaKnown RBP17.93■□□□□ 0.46
GCDH-213ENST00000590627 UBN1Q9NPG3 1134 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 RNF19AQ9NV58 838 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 GIT1Q9Y2X7 761 aa17.93■□□□□ 0.46
GCDH-213ENST00000590627 LRRIQ3A6PVS8 624 aaPredicted RBP17.92■□□□□ 0.46
GCDH-213ENST00000590627 LGALS16A8MUM7 142 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 LACTBL1A8MY62 500 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 PMM2O15305 246 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 AP5Z1O43299 807 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 ITGA4P13612 1032 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 AP3M2P53677 418 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 UBASH3AP57075 661 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 DLG4P78352 724 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 NHLH1Q02575 133 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 KRT17Q04695 432 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 KCNH2Q12809 1159 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 FILIP1LQ4L180 1135 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 AGMOQ6ZNB7 445 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 TRIM67Q6ZTA4 783 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 ALYREFQ86V81 257 aaKnown RBP17.92■□□□□ 0.46
GCDH-213ENST00000590627 WDR49Q8IV35 697 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 VN1R2Q8NFZ6 395 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 ZNF558Q96NG5 402 aa17.92■□□□□ 0.46
GCDH-213ENST00000590627 NAP1L5Q96NT1 182 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms