RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TOPORSQ9NS56 1045 aaPredicted RBP23.31■■□□□ 1.32
R3HDM4-206ENST00000590454 DMAC2Q9NW81 257 aa23.31■■□□□ 1.32
R3HDM4-206ENST00000590454 CNTN3Q9P232 1028 aa23.31■■□□□ 1.32
R3HDM4-206ENST00000590454 TRAF3IP3Q9Y228 551 aa23.31■■□□□ 1.32
R3HDM4-206ENST00000590454 PLXNA3P51805 1871 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 TRIM49BA6NDI0 452 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 ZC3H11AO75152 810 aaKnown RBP eCLIP23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 KIF20AO95235 890 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 NR3C1P04150 777 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 ADRB2P07550 413 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 SNRPFP62306 86 aaKnown RBP23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 SOX4Q06945 474 aaPredicted RBP23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 DSC1Q08554 894 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 SMC1AQ14683 1233 aaKnown RBP23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 KYAT1Q16773 422 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 ASTLQ6HA08 431 aaPredicted RBP23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 CENPPQ6IPU0 288 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 KLHL10Q6JEL2 608 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 CAVIN1Q6NZI2 390 aaKnown RBP23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 COLGALT2Q8IYK4 626 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 MRPL43Q8N983 215 aaKnown RBP23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 TRIML1Q8N9V2 468 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 RDH13Q8NBN7 331 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 C18orf25Q96B23 403 aaPredicted RBP23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 PPP1R10Q96QC0 940 aaKnown RBP23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 SPG21Q9NZD8 308 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 KANSL3Q9P2N6 904 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 CDH22Q9UJ99 828 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 HCFC2Q9Y5Z7 792 aa23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 PDCD11Q14690 1871 aaKnown RBP23.3■■□□□ 1.32
R3HDM4-206ENST00000590454 CACNA1HO95180 2353 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 NT5C1B-RDH14C9J2C7 533 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 F8W810 466 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 KCNE1P15382 129 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 MTHFRP42898 656 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 SLC11A1P49279 550 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 CASP4P49662 377 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 BCAR1P56945 870 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 GRIK3Q13003 919 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 ANKRD40Q6AI12 368 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 ERMP1Q7Z2K6 904 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 TMEM173Q86WV6 379 aaPredicted RBP23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 XXYLT1Q8NBI6 393 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 GOLGA5Q8TBA6 731 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 EEF2KMTQ96G04 330 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 PAAF1Q9BRP4 392 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 GOLGA2P5Q9HBQ8 144 aa23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 CGNQ9P2M7 1197 aaKnown RBP23.29■■□□□ 1.32
R3HDM4-206ENST00000590454 CFAP54Q96N23 3096 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 TULP1O00294 542 aaPredicted RBP23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 CALUO43852 315 aaPredicted RBP23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 THP07101 528 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 NFICP08651 508 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 IGFBP6P24592 240 aaPredicted RBP23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 PPP2R3AQ06190 1150 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 NFKBIBQ15653 356 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 KLHL40Q2TBA0 621 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 DPCR1Q3MIW9 517 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 JADE1Q6IE81 842 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 BRSK2Q8IWQ3 736 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 BCL7CQ8WUZ0 217 aaPredicted RBP23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 NKD2Q969F2 451 aaPredicted RBP23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 GTPBP4Q9BZE4 634 aaKnown RBP23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 MFSD1Q9H3U5 465 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 PLEKHA5Q9HAU0 1116 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 RBAKQ9NYW8 714 aaPredicted RBP23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 CTNND2Q9UQB3 1225 aa23.28■■□□□ 1.32
R3HDM4-206ENST00000590454 C2orf71A6NGG8 1288 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 CASTOR2A6NHX0 329 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 KIAA0391O15091 583 aaKnown RBP23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 EXOC3O60645 756 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 LDHAP00338 332 aaKnown RBP23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 GALTP07902 379 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 CCNE1P24864 410 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 CLCN5P51795 746 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 GUCY2FP51841 1108 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 BMS1Q14692 1282 aaKnown RBP23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 SNRNP35Q16560 246 aaKnown RBP23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 SLC9A9Q8IVB4 645 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 ZDHHC14Q8IZN3 488 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 PLCD3Q8N3E9 789 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 NELFBQ8WX92 580 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 RSPH1Q8WYR4 309 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 KIF12Q96FN5 646 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 DHTKD1Q96HY7 919 aaPredicted RBP23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 MED15Q96RN5 788 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 SMOC2Q9H3U7 446 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 PDE11AQ9HCR9 933 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 TUBGCP4Q9UGJ1 667 aa23.27■■□□□ 1.32
R3HDM4-206ENST00000590454 ZNF233A6NK53 670 aa23.26■■□□□ 1.31
R3HDM4-206ENST00000590454 CLASP2O75122 1294 aaKnown RBP23.26■■□□□ 1.31
R3HDM4-206ENST00000590454 STX17P56962 302 aa23.26■■□□□ 1.31
R3HDM4-206ENST00000590454 NLRP12P59046 1061 aa23.26■■□□□ 1.31
R3HDM4-206ENST00000590454 TUSC3Q13454 348 aa23.26■■□□□ 1.31
R3HDM4-206ENST00000590454 ZBTB6Q15916 424 aa23.26■■□□□ 1.31
R3HDM4-206ENST00000590454 FRMD5Q7Z6J6 570 aa23.26■■□□□ 1.31
R3HDM4-206ENST00000590454 EFCAB13Q8IY85 973 aa23.26■■□□□ 1.31
R3HDM4-206ENST00000590454 TDRD5Q8NAT2 981 aaKnown RBP23.26■■□□□ 1.31
R3HDM4-206ENST00000590454 TMEM174Q8WUU8 243 aa23.26■■□□□ 1.31
R3HDM4-206ENST00000590454 FAM193BQ96PV7 902 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms