RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 SCN1AP35498 2009 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 PRRC2BQ5JSZ5 2229 aaKnown RBP18.17■□□□□ 0.5
LSM14A-208ENST00000590416 PPEF2O14830 753 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 PHACTR2O75167 634 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 CTSAP10619 480 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 POLR2BP30876 1174 aaKnown RBP18.17■□□□□ 0.5
LSM14A-208ENST00000590416 GLUD2P49448 558 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 VAMP7P51809 220 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 BIRC3Q13489 604 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 CAMK1Q14012 370 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 SKIV2LQ15477 1246 aaKnown RBP18.17■□□□□ 0.5
LSM14A-208ENST00000590416 CCDC40Q4G0X9 1142 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 DSTYKQ6XUX3 929 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 RBM43Q6ZSC3 357 aaKnown RBP18.17■□□□□ 0.5
LSM14A-208ENST00000590416 INTS8Q75QN2 995 aaKnown RBP18.17■□□□□ 0.5
LSM14A-208ENST00000590416 TAS1R1Q7RTX1 841 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 C1orf127Q8N9H9 656 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 OR5B17Q8NGF7 314 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 B3GALT6Q96L58 329 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 ZNF560Q96MR9 790 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 MMRN2Q9H8L6 949 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 MRPL17Q9NRX2 175 aaKnown RBP18.17■□□□□ 0.5
LSM14A-208ENST00000590416 RWDD2AQ9UIY3 292 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 ITGA11Q9UKX5 1188 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 AGAP1Q9UPQ3 857 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 PTPRJQ12913 1337 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 MYO7AQ13402 2215 aa18.17■□□□□ 0.5
LSM14A-208ENST00000590416 CDH23Q9H251 3354 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 VWA8A3KMH1 1905 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 LRRIQ3A6PVS8 624 aaPredicted RBP18.16■□□□□ 0.5
LSM14A-208ENST00000590416 FSCN2O14926 492 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 MAPK13O15264 365 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 SLC16A3O15427 465 aaKnown RBP18.16■□□□□ 0.5
LSM14A-208ENST00000590416 FGFR1OPO95684 399 aaKnown RBP18.16■□□□□ 0.5
LSM14A-208ENST00000590416 IGFBP6P24592 240 aaPredicted RBP18.16■□□□□ 0.5
LSM14A-208ENST00000590416 TAF6P49848 677 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 TCEAL5Q5H9L2 206 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 TCERG1LQ5VWI1 586 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 TTI2Q6NXR4 508 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 RBM23Q86U06 439 aaKnown RBP18.16■□□□□ 0.5
LSM14A-208ENST00000590416 PLEKHO2Q8TD55 490 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 PARD3BQ8TEW8 1205 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 RIN2Q8WYP3 895 aaPredicted RBP18.16■□□□□ 0.5
LSM14A-208ENST00000590416 CEP63Q96MT8 703 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 TTPALQ9BTX7 342 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 MKNK1Q9BUB5 465 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 IGFLR1Q9H665 355 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 SSX2IPQ9Y2D8 614 aa18.16■□□□□ 0.5
LSM14A-208ENST00000590416 TRIM49P0CI25 452 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 TRIM49CP0CI26 452 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 POU3F3P20264 500 aaPredicted RBP18.15■□□□□ 0.5
LSM14A-208ENST00000590416 TKTP29401 623 aaKnown RBP18.15■□□□□ 0.5
LSM14A-208ENST00000590416 DLG4P78352 724 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 RBP5P82980 135 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 BFSP1Q12934 665 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 TRPC3Q13507 836 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 STX1AQ16623 288 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 SKOR2Q2VWA4 1001 aaPredicted RBP18.15■□□□□ 0.5
LSM14A-208ENST00000590416 DCAF17Q5H9S7 520 aaPredicted RBP18.15■□□□□ 0.5
LSM14A-208ENST00000590416 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.15■□□□□ 0.5
LSM14A-208ENST00000590416 EP400NLQ6ZTU2 488 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 TRAPPC11Q7Z392 1133 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 ADGRD2Q7Z7M1 963 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 CREBRFQ8IUR6 639 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 MAFAQ8NHW3 353 aaPredicted RBP18.15■□□□□ 0.5
LSM14A-208ENST00000590416 TMC2Q8TDI7 906 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 DUSP9Q99956 384 aaKnown RBP18.15■□□□□ 0.5
LSM14A-208ENST00000590416 TLE6Q9H808 572 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 ANO10Q9NW15 660 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 STXBP5LQ9Y2K9 1186 aa18.15■□□□□ 0.5
LSM14A-208ENST00000590416 ANO9A1A5B4 782 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 C2orf71A6NGG8 1288 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 HIDE1A8MVS5 230 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 PIRO00625 290 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 PNPLA4P41247 253 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 NRIP1P48552 1158 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 AP3M2P53677 418 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 DSG1Q02413 1049 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 NFKBIBQ15653 356 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 PTPN14Q15678 1187 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 SV2CQ496J9 727 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 CD300LGQ6UXG3 332 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 FILIP1Q7Z7B0 1213 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 GLYCTKQ8IVS8 523 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 ZC3H3Q8IXZ2 948 aaKnown RBP18.14■□□□□ 0.49
LSM14A-208ENST00000590416 RNF168Q8IYW5 571 aaPredicted RBP18.14■□□□□ 0.49
LSM14A-208ENST00000590416 SUSD3Q96L08 255 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 SRRTQ9BXP5 876 aaKnown RBP18.14■□□□□ 0.49
LSM14A-208ENST00000590416 EMILIN2Q9BXX0 1053 aa18.14■□□□□ 0.49
LSM14A-208ENST00000590416 TRANK1O15050 2925 aa18.13■□□□□ 0.49
LSM14A-208ENST00000590416 PER2O15055 1255 aa18.13■□□□□ 0.49
LSM14A-208ENST00000590416 LILRA4P59901 499 aa18.13■□□□□ 0.49
LSM14A-208ENST00000590416 MYO1EQ12965 1108 aa18.13■□□□□ 0.49
LSM14A-208ENST00000590416 PSMD5Q16401 504 aa18.13■□□□□ 0.49
LSM14A-208ENST00000590416 RTP2Q5QGT7 225 aa18.13■□□□□ 0.49
LSM14A-208ENST00000590416 PRSS55Q6UWB4 352 aaPredicted RBP18.13■□□□□ 0.49
LSM14A-208ENST00000590416 MRPL43Q8N983 215 aaKnown RBP18.13■□□□□ 0.49
LSM14A-208ENST00000590416 APPL2Q8NEU8 664 aa18.13■□□□□ 0.49
LSM14A-208ENST00000590416 ZNF516Q92618 1163 aa18.13■□□□□ 0.49
LSM14A-208ENST00000590416 ARMCX3Q9UH62 379 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms