RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 C2CD6Q53TS8 623 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 CAVIN4Q5BKX8 364 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 LMBRD2Q68DH5 695 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-228ENST00000590347 DPY19L2P1Q6NXN4 242 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 ANKRD35Q8N283 1001 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 GSTCDQ8NEC7 633 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 MAML1Q92585 1016 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 COA7Q96BR5 231 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.07■□□□□ 0.16
CIRBP-228ENST00000590347 PLCH1Q4KWH8 1693 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 POTEB3A0JP26 581 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 TMEM221A6NGB7 291 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 POTECB2RU33 542 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 CDH16O75309 829 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 COL6A2P12110 1019 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 PEX2P28328 305 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 STAT3P40763 770 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 GJA8P48165 433 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 BTG3Q14201 252 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-228ENST00000590347 C10orf76Q5T2E6 689 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 KLHL35Q6PF15 583 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 IYDQ6PHW0 289 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 USP17L2Q6R6M4 530 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 POTEBQ6S5H4 581 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 SLC5A5Q92911 643 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 GCNAQ96QF7 691 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 LZTS2Q9BRK4 669 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 VPS37BQ9H9H4 285 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 SIX2Q9NPC8 291 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 SH3GLB1Q9Y371 365 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 LSM1O15116 133 aaKnown RBP16.06■□□□□ 0.16
CIRBP-228ENST00000590347 EPHB1P54762 984 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 DRG2P55039 364 aaKnown RBP16.06■□□□□ 0.16
CIRBP-228ENST00000590347 EFTUD2Q15029 972 aaKnown RBP eCLIP16.06■□□□□ 0.161e-12■■■■■ 28.1
CIRBP-228ENST00000590347 SEPT7Q16181 437 aaKnown RBP16.06■□□□□ 0.16
CIRBP-228ENST00000590347 KLHDC10Q6PID8 442 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 CROCCP2Q86T23 111 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 NME8Q8N427 588 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 AK8Q96MA6 479 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 NMUR2Q9GZQ4 415 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 KIAA1586Q9HCI6 787 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 LRRC4BQ9NT99 713 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 SPEF2Q9C093 1822 aa16.06■□□□□ 0.16
CIRBP-228ENST00000590347 ARHGAP42A6NI28 874 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 FTLP02792 175 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 RXRGP48443 463 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 ARFIP2P53365 341 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 MED21Q13503 144 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 PDE1CQ14123 709 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 ARMC7Q9H6L4 198 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 USP29Q9HBJ7 922 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 ZNF212Q9UDV6 495 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 DNAJC12Q9UKB3 198 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 R3HDM2Q9Y2K5 976 aaKnown RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 A0A1B0GTW7 788 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 VILLO15195 856 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 STAMBPO95630 424 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 PLS3P13797 630 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 HSPA1LP34931 641 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 UBE2SQ16763 222 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 GRAMD1BQ3KR37 738 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 MMEL1Q495T6 779 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 FYB2Q5VWT5 728 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 CCDC62Q6P9F0 684 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 C14orf80Q86SX3 495 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 SLC13A5Q86YT5 568 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 UBL4BQ8N7F7 174 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 ZNF653Q96CK0 615 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 OLFM3Q96PB7 478 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 NR1H4Q96RI1 486 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 ZSWIM1Q9BR11 485 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 TMEM120AQ9BXJ8 343 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 ZNF395Q9H8N7 513 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 SAYSD1Q9NPB0 183 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 SPATA7Q9P0W8 599 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 SLC17A7Q9P2U7 560 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 PCYOX1Q9UHG3 505 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 RBMX2Q9Y388 322 aaKnown RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 XPOTO43592 962 aaKnown RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 NDUFB5O43674 189 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 TRPA1O75762 1119 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 PDE5AO76074 875 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 GAS8O95995 478 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 CCDC166P0CW27 439 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 NELFEP18615 380 aaKnown RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 KRT4P19013 534 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 PABPC4Q13310 644 aaKnown RBP eCLIP16.05■□□□□ 0.163e-9■□□□□ 9.7
CIRBP-228ENST00000590347 NFIXQ14938 502 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 SYDE2Q5VT97 1194 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 POU5F2Q8N7G0 328 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 PTCD3Q96EY7 689 aaKnown RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 MAK16Q9BXY0 300 aaKnown RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 OXCT2Q9BYC2 517 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-228ENST00000590347 MAGEF1Q9HAY2 307 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 IL17RBQ9NRM6 502 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 BTBD7Q9P203 1132 aa16.05■□□□□ 0.16
CIRBP-228ENST00000590347 FAM237BA0A1B0GVD1 139 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 RSPH10B2B2RC85 870 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 ADCY3O60266 1144 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 RSPH10BP0C881 870 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms