RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 NR1I3Q14994 352 aa22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 VWA3BQ502W6 1294 aa22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 DCAF17Q5H9S7 520 aaPredicted RBP22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 SPPL3Q8TCT6 385 aa22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 PLEKHO2Q8TD55 490 aa22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 POF1BQ8WVV4 589 aa22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 ANP32BQ92688 251 aaKnown RBP22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 UBQLN1Q9UMX0 589 aaKnown RBP22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 LZTS1Q9Y250 596 aa22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 PDCD11Q14690 1871 aaKnown RBP22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 ZNF233A6NK53 670 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 CSPG5O95196 566 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 ADGRE1Q14246 886 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 TMEM132DQ14C87 1099 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 FILIP1LQ4L180 1135 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 MFSD14AQ96MC6 490 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 NDST4Q9H3R1 872 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 GOLGA2P5Q9HBQ8 144 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 LMCD1Q9NZU5 365 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 CACNG4Q9UBN1 327 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 DERAQ9Y315 318 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 TRANK1O15050 2925 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 PLXNA4Q9HCM2 1894 aa22.97■■□□□ 1.27
R3HDM4-204ENST00000589428 TPM3P06753 285 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 TPM2P07951 284 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 TRIM49P0CI25 452 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 TRIM49CP0CI26 452 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 PTPN21Q16825 1174 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 JADE1Q6IE81 842 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 C18orf25Q96B23 403 aaPredicted RBP22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 MRPL38Q96DV4 380 aaKnown RBP22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 MARCH5Q9NX47 278 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 STK39Q9UEW8 545 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 TUBGCP4Q9UGJ1 667 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 C2CD2Q9Y426 696 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 PES1O00541 588 aaKnown RBP22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 NFICP08651 508 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 KRT13P13646 458 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 MCCD1P59942 119 aaPredicted RBP22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 DLG4P78352 724 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 SOX4Q06945 474 aaPredicted RBP22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 TCERG1LQ5VWI1 586 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 BEST2Q8NFU1 509 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 BCL7CQ8WUZ0 217 aaPredicted RBP22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 DDX27Q96GQ7 796 aaKnown RBP22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 PAAF1Q9BRP4 392 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 TLR9Q9NR96 1032 aa22.96■■□□□ 1.27
R3HDM4-204ENST00000589428 CYP3A5P20815 502 aa22.95■■□□□ 1.26
R3HDM4-204ENST00000589428 CLCNKBP51801 687 aa22.95■■□□□ 1.26
R3HDM4-204ENST00000589428 VAMP7P51809 220 aa22.95■■□□□ 1.26
R3HDM4-204ENST00000589428 WNT7BP56706 349 aa22.95■■□□□ 1.26
R3HDM4-204ENST00000589428 SURF1Q15526 300 aa22.95■■□□□ 1.26
R3HDM4-204ENST00000589428 C1orf220Q5T0J3 134 aa22.95■■□□□ 1.26
R3HDM4-204ENST00000589428 NT5DC4Q86YG4 428 aa22.95■■□□□ 1.26
R3HDM4-204ENST00000589428 RABGGTAQ92696 567 aa22.95■■□□□ 1.26
R3HDM4-204ENST00000589428 ADAM28Q9UKQ2 775 aa22.95■■□□□ 1.26
R3HDM4-204ENST00000589428 ANK1P16157 1881 aa22.95■■□□□ 1.26
R3HDM4-204ENST00000589428 POU3F3P20264 500 aaPredicted RBP22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 CDC25BP30305 580 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 RPL9P32969 192 aaKnown RBP22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 UBXN1Q04323 297 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 KCNH2Q12809 1159 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 TIGD5Q53EQ6 642 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 DDX53Q86TM3 631 aaKnown RBP22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 PARD3BQ8TEW8 1205 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 CCDC127Q96BQ5 260 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 PDLIM2Q96JY6 352 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 ENTPD7Q9NQZ7 604 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 MTCH2Q9Y6C9 303 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 F8W810 466 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 PODXLO00592 558 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 TADA2AO75478 443 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 KIF4AO95239 1232 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 AFPP02771 609 aaKnown RBP22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 DNAJB1P25685 340 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 PBX1P40424 430 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 BMS1Q14692 1282 aaKnown RBP22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 PSMD6Q15008 389 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 ZBTB6Q15916 424 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 UPP1Q16831 310 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 MICALL1Q8N3F8 863 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 TMC2Q8TDI7 906 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 HASPINQ8TF76 798 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 PDE11AQ9HCR9 933 aa22.94■■□□□ 1.26
R3HDM4-204ENST00000589428 SF3B1O75533 1304 aaKnown RBP eCLIP22.93■■□□□ 1.262e-7■■■■■ 121.3
R3HDM4-204ENST00000589428 LRRIQ3A6PVS8 624 aaPredicted RBP22.93■■□□□ 1.26
R3HDM4-204ENST00000589428 B3GAT3O94766 335 aa22.93■■□□□ 1.26
R3HDM4-204ENST00000589428 DCLRE1AQ6PJP8 1040 aa22.93■■□□□ 1.26
R3HDM4-204ENST00000589428 VSTM4Q8IW00 320 aa22.93■■□□□ 1.26
R3HDM4-204ENST00000589428 EFCAB13Q8IY85 973 aa22.93■■□□□ 1.26
R3HDM4-204ENST00000589428 VPS52Q8N1B4 723 aa22.93■■□□□ 1.26
R3HDM4-204ENST00000589428 MICAL1Q8TDZ2 1067 aa22.93■■□□□ 1.26
R3HDM4-204ENST00000589428 FNBP1Q96RU3 617 aa22.93■■□□□ 1.26
R3HDM4-204ENST00000589428 TCF25Q9BQ70 676 aa22.93■■□□□ 1.26
R3HDM4-204ENST00000589428 TMEM189-UBE2V1I3L0A0 370 aa22.92■■□□□ 1.26
R3HDM4-204ENST00000589428 TFAMQ00059 246 aaKnown RBP22.92■■□□□ 1.26
R3HDM4-204ENST00000589428 ENPEPQ07075 957 aa22.92■■□□□ 1.26
R3HDM4-204ENST00000589428 CAMK1Q14012 370 aa22.92■■□□□ 1.26
R3HDM4-204ENST00000589428 FKBP15Q5T1M5 1219 aa22.92■■□□□ 1.26
R3HDM4-204ENST00000589428 FUT10Q6P4F1 479 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms