RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 CXCL16Q9H2A7 254 aa11.53□□□□□ -0.56
CLPTM1-211ENST00000589347 MTRRQ9UBK8 725 aa11.53□□□□□ -0.56
CLPTM1-211ENST00000589347 CDH22Q9UJ99 828 aa11.53□□□□□ -0.56
CLPTM1-211ENST00000589347 CFAP45Q9UL16 551 aa11.53□□□□□ -0.56
CLPTM1-211ENST00000589347 SORCS3Q9UPU3 1222 aa11.53□□□□□ -0.56
CLPTM1-211ENST00000589347 ZNF638Q14966 1978 aaKnown RBP11.53□□□□□ -0.56
CLPTM1-211ENST00000589347 USP24Q9UPU5 2620 aa11.53□□□□□ -0.56
CLPTM1-211ENST00000589347 CHD8Q9HCK8 2581 aa11.52□□□□□ -0.56
CLPTM1-211ENST00000589347 C8AP07357 584 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 RPL17P18621 184 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 PAX3P23760 479 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 TKTP29401 623 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 NMT1P30419 496 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 HOXA9P31269 272 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 GBP2P32456 591 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 POSTNQ15063 836 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 SLC10A6Q3KNW5 377 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 SEZ6Q53EL9 994 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 ZNF280DQ6N043 979 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 RTL10Q7L3V2 364 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 UBALD2Q8IYN6 164 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 PDILTQ8N807 584 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 LNX1Q8TBB1 728 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 FOXD4L4Q8WXT5 416 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 RMDN1Q96DB5 314 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 ZMAT2Q96NC0 199 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 ACCSQ96QU6 501 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 FIZ1Q96SL8 496 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 PRKD2Q9BZL6 878 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 WDR6Q9NNW5 1121 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 OLFML3Q9NRN5 406 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 FAM13BQ9NYF5 915 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 TUBGCP4Q9UGJ1 667 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 PCDHB13Q9Y5F0 798 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 BACE2Q9Y5Z0 518 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 CDY1Q9Y6F8 540 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 NOTCH4Q99466 2003 aa11.52□□□□□ -0.57
CLPTM1-211ENST00000589347 NUP210Q8TEM1 1887 aaPredicted RBP11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 TTC26A0AVF1 554 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 MYMKA6NI61 221 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 RFPL2O75678 378 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 ZMYND10O75800 440 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 LRPAP1P30533 357 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 ELF1P32519 619 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 BRCC3P46736 316 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 ME1P48163 572 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 SOX4Q06945 474 aaPredicted RBP11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 RAB33AQ14088 237 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 TMEM132DQ14C87 1099 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 VARS2Q5ST30 1063 aaKnown RBP11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 L1TD1Q5T7N2 865 aaKnown RBP11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 ADALQ6DHV7 355 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 GET4Q7L5D6 327 aaPredicted RBP11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 ZNF720Q7Z2F6 126 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 SYCP3Q8IZU3 236 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 IQUBQ8NA54 791 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 C3orf58Q8NDZ4 430 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 POMGNT1Q8WZA1 660 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 C18orf25Q96B23 403 aaPredicted RBP11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 DHX58Q96C10 678 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 SUSD3Q96L08 255 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 CLSTN3Q9BQT9 956 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 OXCT2Q9BYC2 517 aaPredicted RBP11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 TMEM206Q9H813 350 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 PANK4Q9NVE7 773 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 AGO2Q9UKV8 859 aaKnown RBP11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 DERAQ9Y315 318 aa11.51□□□□□ -0.57
CLPTM1-211ENST00000589347 DENND4CQ5VZ89 1909 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 SPTBN2O15020 2390 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 MAP1BP46821 2468 aaKnown RBP11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 A0A0B4J269 797 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 FRMD3A2A2Y4 597 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 I3L4J1 428 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 PAPLNO95428 1278 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 LDHAP00338 332 aaKnown RBP11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 POU2F2P09086 479 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 SPATA31D3P0C874 917 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 MYBP10242 640 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 OR1D2P34982 312 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 TNFSF9P41273 254 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 ASIC1P78348 528 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 ENOX2Q16206 610 aaKnown RBP11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 UVSSAQ2YD98 709 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 FOXD4L6Q3SYB3 417 aaPredicted RBP11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 CTXN3Q4LDR2 81 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 ZC2HC1CQ53FD0 456 aaPredicted RBP11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 ASTLQ6HA08 431 aaPredicted RBP11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 KANK3Q6NY19 840 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 LILRA6Q6PI73 481 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 FOXD4L3Q6VB84 417 aaPredicted RBP11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 SPATA31D4Q6ZUB0 917 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 DGLUCYQ7Z3D6 616 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 USP37Q86T82 979 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 SPRYD3Q8NCJ5 442 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 SLC7A14Q8TBB6 771 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 DNAJC19Q96DA6 116 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 HAPLN2Q9GZV7 340 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms