RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 SIX4Q9UIU6 781 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 TRIP11Q15643 1979 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 PTPRSQ13332 1948 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 B4GALT3O60512 393 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 TADA2AO75478 443 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 VNN1O95497 513 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 STAU1O95793 577 aaKnown RBP13.11□□□□□ -0.31
DNMT1-218ENST00000589294 KRT19P08727 400 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 ATP1A3P13637 1013 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 POLR2BP30876 1174 aaKnown RBP13.11□□□□□ -0.31
DNMT1-218ENST00000589294 PBX2P40425 430 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 GUCY2FP51841 1108 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 COPB1P53618 953 aaKnown RBP13.11□□□□□ -0.31
DNMT1-218ENST00000589294 LILRA4P59901 499 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 ERVK-21P61565 698 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 KRT17Q04695 432 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 NCOA4Q13772 614 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 FILIP1LQ4L180 1135 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 CBWD6Q4V339 395 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 CBWD3Q5JTY5 395 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 CBWD5Q5RIA9 395 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 APTXQ7Z2E3 356 aaKnown RBP13.11□□□□□ -0.31
DNMT1-218ENST00000589294 RNF214Q8ND24 703 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 FAXDC2Q96IV6 333 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 TGS1Q96RS0 853 aaKnown RBP13.11□□□□□ -0.31
DNMT1-218ENST00000589294 PAAF1Q9BRP4 392 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 VPS16Q9H269 839 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 VRTNQ9H8Y1 702 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 SLC28A3Q9HAS3 691 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 RAB20Q9NX57 234 aa13.11□□□□□ -0.31
DNMT1-218ENST00000589294 YBX2Q9Y2T7 364 aaKnown RBP13.11□□□□□ -0.31
DNMT1-218ENST00000589294 ANK1P16157 1881 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 RALGAPA2Q2PPJ7 1873 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 ARHGEF37A1IGU5 675 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 C5orf67F2Z3F1 127 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 SERPINC1P01008 464 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 HLA-DRAP01903 254 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 FAM163BP0C2L3 166 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 DNAJB2P25686 324 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 TAF6P49848 677 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 PLCB3Q01970 1234 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 TAP1Q03518 808 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 ELAVL2Q12926 359 aaKnown RBP13.1□□□□□ -0.31
DNMT1-218ENST00000589294 UVSSAQ2YD98 709 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 SV2CQ496J9 727 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 FKBP15Q5T1M5 1219 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 CD300LGQ6UXG3 332 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 GBP6Q6ZN66 633 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 SLC39A11Q8N1S5 342 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 CCDC150Q8NCX0 1101 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 EHBP1Q8NDI1 1231 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 TAS1R2Q8TE23 839 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 TIFAQ96CG3 184 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 IGSF21Q96ID5 467 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 ZNF560Q96MR9 790 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 MMRN2Q9H8L6 949 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 GDAP2Q9NXN4 497 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 TAB2Q9NYJ8 693 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 HCSTQ9UBK5 93 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 ADAM28Q9UKQ2 775 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-218ENST00000589294 NUB1Q9Y5A7 615 aa13.1□□□□□ -0.31
DNMT1-218ENST00000589294 LGALS16A8MUM7 142 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 KPNA7A9QM74 516 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 EFEMP2O95967 443 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 ASS1P00966 412 aaKnown RBP13.09□□□□□ -0.31
DNMT1-218ENST00000589294 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.31
DNMT1-218ENST00000589294 MYL6P60660 151 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 FANCCQ00597 558 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 MYL7Q01449 175 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 EPC2Q52LR7 807 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 WDR44Q5JSH3 913 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 PPP2R2DQ66LE6 453 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 DPH6Q7L8W6 267 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 DDX53Q86TM3 631 aaKnown RBP13.09□□□□□ -0.31
DNMT1-218ENST00000589294 RABGGTAQ92696 567 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 TMEM169Q96HH4 297 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 IMPG2Q9BZV3 1241 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 XYLT2Q9H1B5 865 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 NKX2-4Q9H2Z4 354 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
DNMT1-218ENST00000589294 PUF60Q9UHX1 559 aaKnown RBP13.09□□□□□ -0.31
DNMT1-218ENST00000589294 LZTS1Q9Y250 596 aa13.09□□□□□ -0.31
DNMT1-218ENST00000589294 TDRD15B5MCY1 1934 aaKnown RBP13.09□□□□□ -0.31
DNMT1-218ENST00000589294 PDCD11Q14690 1871 aaKnown RBP13.08□□□□□ -0.32
DNMT1-218ENST00000589294 CHD9Q3L8U1 2897 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 A0A1B0GTH6 734 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 NT5C1B-RDH14C9J2C7 533 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 M0QZQ0 153 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 PES1O00541 588 aaKnown RBP13.08□□□□□ -0.32
DNMT1-218ENST00000589294 PPEF2O14830 753 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 SPTLC1O15269 473 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 FGF18O76093 207 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 KIF4AO95239 1232 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 P4HA1P13674 534 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 CTNNB1P35222 781 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms