RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 NDST4Q9H3R1 872 aa21.6■■□□□ 1.05
DNMT1-216ENST00000588952 AGAP1Q9UPQ3 857 aa21.6■■□□□ 1.05
DNMT1-216ENST00000588952 SPTLC1O15269 473 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 AP5Z1O43299 807 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 KIF4AO95239 1232 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 KRT19P08727 400 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 MYL6P60660 151 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 FANCCQ00597 558 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 EPC2Q52LR7 807 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 SPOUT1Q5T280 376 aaKnown RBP21.59■■□□□ 1.05
DNMT1-216ENST00000588952 HASPINQ8TF76 798 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 UROC1Q96N76 676 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 NAP1L5Q96NT1 182 aaPredicted RBP21.59■■□□□ 1.05
DNMT1-216ENST00000588952 NKX2-4Q9H2Z4 354 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.59■■□□□ 1.051e-7■■■■■ 62
DNMT1-216ENST00000588952 LAMA3Q16787 3333 aa21.59■■□□□ 1.05
DNMT1-216ENST00000588952 SCN1AP35498 2009 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 LGALS16A8MUM7 142 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 PMM2O15305 246 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 PHACTR2O75167 634 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 LAG3P18627 525 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 RPL9P32969 192 aaKnown RBP21.58■■□□□ 1.05
DNMT1-216ENST00000588952 PIK3CAP42336 1068 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 RBP5P82980 135 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 NCOA4Q13772 614 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 KCNT2Q6UVM3 1135 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 ANKRD20A12PQ8NF67 263 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 DDX27Q96GQ7 796 aaKnown RBP21.58■■□□□ 1.05
DNMT1-216ENST00000588952 C17orf80Q9BSJ5 609 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 PI4K2AQ9BTU6 479 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 XYLT2Q9H1B5 865 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 COQ4Q9Y3A0 265 aa21.58■■□□□ 1.05
DNMT1-216ENST00000588952 PES1O00541 588 aaKnown RBP21.57■■□□□ 1.04
DNMT1-216ENST00000588952 N4BP1O75113 896 aaKnown RBP21.57■■□□□ 1.04
DNMT1-216ENST00000588952 TAP1Q03518 808 aa21.57■■□□□ 1.04
DNMT1-216ENST00000588952 PTPN21Q16825 1174 aa21.57■■□□□ 1.04
DNMT1-216ENST00000588952 SLC39A11Q8N1S5 342 aa21.57■■□□□ 1.04
DNMT1-216ENST00000588952 LMO3Q8TAP4 145 aa21.57■■□□□ 1.04
DNMT1-216ENST00000588952 ZNF558Q96NG5 402 aa21.57■■□□□ 1.04
DNMT1-216ENST00000588952 CRACR2AQ9BSW2 395 aa21.57■■□□□ 1.04
DNMT1-216ENST00000588952 FAN1Q9Y2M0 1017 aa21.57■■□□□ 1.04
DNMT1-216ENST00000588952 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.57■■□□□ 1.04
DNMT1-216ENST00000588952 NLRC5Q86WI3 1866 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 A0A1B0GTH6 734 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 P4HA2O15460 535 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 TEX33O43247 280 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 B3GAT3O94766 335 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 ALDH2P05091 517 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 BRCC3P46736 316 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 SMAD3P84022 425 aaKnown RBP21.56■■□□□ 1.04
DNMT1-216ENST00000588952 TRPC3Q13507 836 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 RAB30Q15771 203 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 SPOPLQ6IQ16 392 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 DCLRE1AQ6PJP8 1040 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 LRRC52Q8N7C0 313 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 FBXL13Q8NEE6 735 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 VN1R3Q9BXE9 311 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 APOBEC3GQ9HC16 384 aaKnown RBP21.56■■□□□ 1.04
DNMT1-216ENST00000588952 RTN4Q9NQC3 1192 aaKnown RBP21.56■■□□□ 1.04
DNMT1-216ENST00000588952 RAB20Q9NX57 234 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 MSRAQ9UJ68 235 aa21.56■■□□□ 1.04
DNMT1-216ENST00000588952 A0A1W2PPC1 479 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 TMEM189-UBE2V1I3L0A0 370 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 I3L4J1 428 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 SERPINC1P01008 464 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 DNAJB2P25686 324 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 ALDH7A1P49419 539 aaKnown RBP21.55■■□□□ 1.04
DNMT1-216ENST00000588952 LILRA4P59901 499 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 APBA1Q02410 837 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 KCNMA1Q12791 1236 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 HPDLQ96IR7 371 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 COLEC11Q9BWP8 271 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 INTS2Q9H0H0 1204 aaKnown RBP21.55■■□□□ 1.04
DNMT1-216ENST00000588952 IFNKQ9P0W0 207 aa21.55■■□□□ 1.04
DNMT1-216ENST00000588952 CHD9Q3L8U1 2897 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 ASS1P00966 412 aaKnown RBP21.54■■□□□ 1.04
DNMT1-216ENST00000588952 TPM2P07951 284 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 SLC9A1P19634 815 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 CTNNB1P35222 781 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 BMPR1AP36894 532 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 AARSP49588 968 aaKnown RBP eCLIP21.54■■□□□ 1.04
DNMT1-216ENST00000588952 TAF6P49848 677 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 KLK7P49862 253 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 LRIT3Q3SXY7 679 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 TIGD5Q53EQ6 642 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 DPY19L2P1Q6NXN4 242 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 IGSF21Q96ID5 467 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 ZNF560Q96MR9 790 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 GCNT4Q9P109 453 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 ADAM28Q9UKQ2 775 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 MTUS1Q9ULD2 1270 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 POLIQ9UNA4 740 aa21.54■■□□□ 1.04
DNMT1-216ENST00000588952 GTPBP10A4D1E9 387 aaKnown RBP21.53■■□□□ 1.04
DNMT1-216ENST00000588952 STAU1O95793 577 aaKnown RBP21.53■■□□□ 1.04
DNMT1-216ENST00000588952 EFEMP2O95967 443 aa21.53■■□□□ 1.04
DNMT1-216ENST00000588952 UBXN1Q04323 297 aa21.53■■□□□ 1.04
DNMT1-216ENST00000588952 NR1I3Q14994 352 aa21.53■■□□□ 1.04
DNMT1-216ENST00000588952 ZNF699Q32M78 642 aa21.53■■□□□ 1.04
DNMT1-216ENST00000588952 GBP6Q6ZN66 633 aa21.53■■□□□ 1.04
DNMT1-216ENST00000588952 EHBP1Q8NDI1 1231 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms