RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZSCAN32Q9NX65 697 aa20.16■□□□□ 0.82
CCDC43-204ENST00000588687 CEP72Q9P209 647 aa20.16■□□□□ 0.82
CCDC43-204ENST00000588687 VNN2O95498 520 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 CDC25AP30304 524 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 RPL9P32969 192 aaKnown RBP20.15■□□□□ 0.82
CCDC43-204ENST00000588687 HMGN5P82970 282 aaKnown RBP20.15■□□□□ 0.82
CCDC43-204ENST00000588687 ADCY1Q08828 1119 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 MTAPQ13126 283 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 GRM2Q14416 872 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 SLC10A6Q3KNW5 377 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 TSSK4Q6SA08 328 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 ZNF852Q6ZMS4 543 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 MAP4K3Q8IVH8 894 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 DRC1Q96MC2 740 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 ZSWIM3Q96MP5 696 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 ACAP3Q96P50 834 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 NELL2Q99435 816 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 NTPCRQ9BSD7 190 aaKnown RBP20.15■□□□□ 0.82
CCDC43-204ENST00000588687 C17orf75Q9HAS0 396 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 CYP4F11Q9HBI6 524 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 KMT5AQ9NQR1 393 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 TUBGCP4Q9UGJ1 667 aa20.15■□□□□ 0.82
CCDC43-204ENST00000588687 RBM19Q9Y4C8 960 aaKnown RBP20.15■□□□□ 0.82
CCDC43-204ENST00000588687 H7C4K7 107 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 ARNTLO00327 626 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 SLC16A4O15374 487 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 GUCY2CP25092 1073 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 ARPP19P56211 112 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 CTXN3Q4LDR2 81 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 VITQ6UXI7 678 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 HS6ST3Q8IZP7 471 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 TMEM161BQ8NDZ6 487 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 BEST2Q8NFU1 509 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 DDX12PQ92771 950 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 TBC1D32Q96NH3 1257 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 HAPLN2Q9GZV7 340 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 CHRDQ9H2X0 955 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 TRPV5Q9NQA5 729 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 AFF4Q9UHB7 1163 aaKnown RBP20.14■□□□□ 0.81
CCDC43-204ENST00000588687 NOL7Q9UMY1 257 aaKnown RBP20.14■□□□□ 0.81
CCDC43-204ENST00000588687 SMG5Q9UPR3 1016 aaKnown RBP20.14■□□□□ 0.81
CCDC43-204ENST00000588687 DNM3Q9UQ16 869 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 STK24Q9Y6E0 443 aa20.14■□□□□ 0.81
CCDC43-204ENST00000588687 KMT2BQ9UMN6 2715 aaPredicted RBP20.14■□□□□ 0.81
CCDC43-204ENST00000588687 TOM1L1O75674 476 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 TGM1P22735 817 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 ELF1P32519 619 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 PRPHP41219 470 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 NOLC1Q14978 699 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCDC43-204ENST00000588687 SEZ6Q53EL9 994 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 HYIQ5T013 277 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 ZNF280DQ6N043 979 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 PDZD4Q76G19 769 aaPredicted RBP20.13■□□□□ 0.81
CCDC43-204ENST00000588687 SPIRE2Q8WWL2 714 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 KIF2CQ99661 725 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 TRPV4Q9HBA0 871 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 ZFP14Q9HCL3 533 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 NUB1Q9Y5A7 615 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 ZFHX4Q86UP3 3567 aa20.13■□□□□ 0.81
CCDC43-204ENST00000588687 SFI1A8K8P3 1242 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 M0QZQ0 153 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 LAD1O00515 517 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 ZNF197O14709 1029 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 MAPTP10636 758 aaKnown RBP20.12■□□□□ 0.81
CCDC43-204ENST00000588687 HARSP12081 509 aaKnown RBP20.12■□□□□ 0.81
CCDC43-204ENST00000588687 MCM4P33991 863 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 AARSP49588 968 aaKnown RBP eCLIP20.12■□□□□ 0.81
CCDC43-204ENST00000588687 MCL1Q07820 350 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 TWF1Q12792 350 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 RSPO4Q2I0M5 234 aaPredicted RBP20.12■□□□□ 0.81
CCDC43-204ENST00000588687 RNF19BQ6ZMZ0 732 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 MAMSTRQ6ZN01 415 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 TMC8Q8IU68 726 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 ATRIPQ8WXE1 791 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 SMARCD2Q92925 531 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 TIPINQ9BVW5 301 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 LRRC3Q9BY71 257 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 RAB34Q9BZG1 259 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 CRISPLD1Q9H336 500 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.12■□□□□ 0.81
CCDC43-204ENST00000588687 ANKFY1Q9P2R3 1169 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 MAFFQ9ULX9 164 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 PCDHB8Q9UN66 801 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 MRPS17Q9Y2R5 130 aaKnown RBP20.12■□□□□ 0.81
CCDC43-204ENST00000588687 YIPF1Q9Y548 306 aa20.12■□□□□ 0.81
CCDC43-204ENST00000588687 NUP210Q8TEM1 1887 aaPredicted RBP20.11■□□□□ 0.81
CCDC43-204ENST00000588687 KIF26AQ9ULI4 1882 aaPredicted RBP20.11■□□□□ 0.81
CCDC43-204ENST00000588687 TPRP12270 2363 aaKnown RBP20.11■□□□□ 0.81
CCDC43-204ENST00000588687 NCAM2O15394 837 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 CXCL8P10145 99 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 ZBTB6Q15916 424 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 KRT79Q5XKE5 535 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 ZPBP2Q6X784 338 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 KCNN1Q92952 543 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 RSPRY1Q96DX4 576 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 PNMA5Q96PV4 448 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 TCHPQ9BT92 498 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 TRMT61BQ9BVS5 477 aaKnown RBP20.11■□□□□ 0.81
CCDC43-204ENST00000588687 DNAJC25Q9H1X3 360 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 BRD9Q9H8M2 597 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms