RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SPG21Q9NZD8 308 aa11.56□□□□□ -0.56
SMARCA4-213ENST00000587988 AGAP1Q9UPQ3 857 aa11.56□□□□□ -0.56
SMARCA4-213ENST00000587988 PCDHB12Q9Y5F1 795 aa11.56□□□□□ -0.56
SMARCA4-213ENST00000587988 LAMA2P24043 3122 aaKnown RBP11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 SMTNL1A8MU46 457 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 KCNJ18B7U540 433 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 I3L4J1 428 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 SPTLC1O15269 473 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 TADA2AO75478 443 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 FGF18O76093 207 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 B3GAT3O94766 335 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 EFEMP2O95967 443 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 ZNF18P17022 549 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 MTIF2P46199 727 aaKnown RBP11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 AP3M2P53677 418 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 KCNH2Q12809 1159 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 BIRC3Q13489 604 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 KCNJ12Q14500 433 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 ZACNQ401N2 412 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 CBWD6Q4V339 395 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 TCP11X2Q5H9J9 407 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 CBWD3Q5JTY5 395 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 CBWD5Q5RIA9 395 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 TAS1R1Q7RTX1 841 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 USP37Q86T82 979 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 FAM114A1Q8IWE2 563 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 FAM200AQ8TCP9 573 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 SAMD11Q96NU1 681 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 PLVAPQ9BX97 442 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 GPR62Q9BZJ7 368 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 TMEM8AQ9HCN3 771 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 ALG13Q9NP73 1137 aaKnown RBP11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 MAGEC2Q9UBF1 373 aaPredicted RBP11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 ADAM28Q9UKQ2 775 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 ITGA11Q9UKX5 1188 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 RWDD3Q9Y3V2 267 aa11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMARCA4-213ENST00000587988 BECN2A8MW95 431 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 H3BNC9 293 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 TMEM189-UBE2V1I3L0A0 370 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 GRM6O15303 877 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 PHACTR2O75167 634 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 HLA-DRAP01903 254 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 RB1P06400 928 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 ATP1A3P13637 1013 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 DNAJB1P25685 340 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 GTF2H1P32780 548 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 FMO5P49326 533 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 LILRA4P59901 499 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 MYL6P60660 151 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 RBP5P82980 135 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 PLCB3Q01970 1234 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 KRT31Q15323 416 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 TIGD5Q53EQ6 642 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 MIIPQ5JXC2 388 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 KRT39Q6A163 491 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 FUT10Q6P4F1 479 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 GAS2L3Q86XJ1 694 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 SPPL3Q8TCT6 385 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 TAS1R2Q8TE23 839 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 SEMA4DQ92854 862 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 TMEM169Q96HH4 297 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 TUBGCP2Q9BSJ2 902 aa11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.54□□□□□ -0.562e-12■■■■■ 298.1
SMARCA4-213ENST00000587988 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.54□□□□□ -0.56
SMARCA4-213ENST00000587988 LPXNO60711 386 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 CSPG5O95196 566 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 CAVIN2O95810 425 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 AFPP02771 609 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 CDK11BP21127 795 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 EEF1GP26641 437 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 PPM1AP35813 382 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 AARSP49588 968 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 TAF6P49848 677 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 MXI1P50539 228 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 GPM6BQ13491 265 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 TRPC3Q13507 836 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 NCOA4Q13772 614 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 CAMK1Q14012 370 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 GRIN2CQ14957 1233 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 MAN2A1Q16706 1144 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 SPOPLQ6IQ16 392 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 APTXQ7Z2E3 356 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 DDX53Q86TM3 631 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 RNF168Q8IYW5 571 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 LRRC52Q8N7C0 313 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 RNF214Q8ND24 703 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 GDPD5Q8WTR4 605 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 POF1BQ8WVV4 589 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 HPDLQ96IR7 371 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 B3GALT6Q96L58 329 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 FAM161BQ96MY7 647 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 PI4K2AQ9BTU6 479 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 C11orf84Q9BUA3 381 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 XYLT2Q9H1B5 865 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 VPS16Q9H269 839 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 TAB2Q9NYJ8 693 aa11.53□□□□□ -0.56
SMARCA4-213ENST00000587988 LIMA1Q9UHB6 759 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms