RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 MRPL58Q14197 206 aaKnown RBP20.47■□□□□ 0.87
TRIM47-205ENST00000587774 SLC5A9Q2M3M2 681 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 MTSS1LQ765P7 747 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 MYCT1Q8N699 235 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 RAD54LQ92698 747 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 PARVGQ9HBI0 331 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 FBXL5Q9UKA1 691 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 TBX20Q9UMR3 447 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 ARHGEF37A1IGU5 675 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 PROB1E7EW31 1015 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 H7C4K7 107 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 STK25O00506 426 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 PRRG1O14668 218 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 CLTAP09496 248 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 ATF2P15336 505 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 NBL1P41271 181 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 PPP2R3AQ06190 1150 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 CTXN3Q4LDR2 81 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 ZBTB41Q5SVQ8 909 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 ZNF280DQ6N043 979 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 DTWD2Q8NBA8 298 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 DDX12PQ92771 950 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 PLEKHA5Q9HAU0 1116 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 KCNH3Q9ULD8 1083 aa20.46■□□□□ 0.87
TRIM47-205ENST00000587774 SEC24AO95486 1093 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 PIGRP01833 764 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 LRG1P02750 347 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 KRT18P05783 430 aaKnown RBP20.45■□□□□ 0.86
TRIM47-205ENST00000587774 RHOP08100 348 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 ELF1P32519 619 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 GPC5P78333 572 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 ENOX2Q16206 610 aaKnown RBP20.45■□□□□ 0.86
TRIM47-205ENST00000587774 LARP4BQ92615 738 aaKnown RBP20.45■□□□□ 0.86
TRIM47-205ENST00000587774 KIF12Q96FN5 646 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 FIZ1Q96SL8 496 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 KXD1Q9BQD3 176 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 ZHX3Q9H4I2 956 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 CYP4F11Q9HBI6 524 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 MRPS23Q9Y3D9 190 aaKnown RBP20.45■□□□□ 0.86
TRIM47-205ENST00000587774 INSL5Q9Y5Q6 135 aa20.45■□□□□ 0.86
TRIM47-205ENST00000587774 PTPRZ1P23471 2315 aaPredicted RBP20.45■□□□□ 0.86
TRIM47-205ENST00000587774 GVINP1Q7Z2Y8 2422 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 OGTO15294 1046 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 TRAK2O60296 914 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 TBCAO75347 108 aaKnown RBP20.44■□□□□ 0.86
TRIM47-205ENST00000587774 SCP2P22307 547 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 LRPAP1P30533 357 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 ANGPT1Q15389 498 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 ZBTB6Q15916 424 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 SLC39A4Q6P5W5 647 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 TCEAL8Q8IYN2 117 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 APPL2Q8NEU8 664 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 CCSER1Q9C0I3 900 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 UBQLN1Q9UMX0 589 aaKnown RBP20.44■□□□□ 0.86
TRIM47-205ENST00000587774 PCDHB8Q9UN66 801 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 CLIC4Q9Y696 253 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 GREB1Q4ZG55 1949 aa20.44■□□□□ 0.86
TRIM47-205ENST00000587774 LACTBL1A8MY62 500 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 M0QZQ0 153 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 CEBPBP17676 345 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 NMT1P30419 496 aaKnown RBP20.43■□□□□ 0.86
TRIM47-205ENST00000587774 GUCY2FP51841 1108 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 PTPAQ15257 358 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 SPECC1Q5M775 1068 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 TPGS2Q68CL5 300 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 PHLDB3Q6NSJ2 640 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 POTEHQ6S545 545 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 USP49Q70CQ1 688 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 ASCL5Q7RTU5 278 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 FRMD5Q7Z6J6 570 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 MAP4K3Q8IVH8 894 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 EPSTI1Q96J88 318 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 CORO1BQ9BR76 489 aa20.43■□□□□ 0.86
TRIM47-205ENST00000587774 AVENQ9NQS1 362 aaPredicted RBP20.43■□□□□ 0.86
TRIM47-205ENST00000587774 A0A0B4J269 797 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 PRR23AA6NEV1 266 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 DCNP07585 359 aaKnown RBP20.42■□□□□ 0.86
TRIM47-205ENST00000587774 CPB1P15086 417 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 PTPN2P17706 415 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 CYP3A5P20815 502 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 PDCP20941 246 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 AARSP49588 968 aaKnown RBP eCLIP20.42■□□□□ 0.86
TRIM47-205ENST00000587774 YWHAHQ04917 246 aaPredicted RBP20.42■□□□□ 0.86
TRIM47-205ENST00000587774 ADCY1Q08828 1119 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 KYAT1Q16773 422 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 PRSS36Q5K4E3 855 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 MCRS1Q96EZ8 462 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 MSTO1Q9BUK6 570 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 FOXQ1Q9C009 403 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 RPF1Q9H9Y2 349 aaKnown RBP20.42■□□□□ 0.86
TRIM47-205ENST00000587774 FBXO2Q9UK22 296 aaPredicted RBP20.42■□□□□ 0.86
TRIM47-205ENST00000587774 TIMM13Q9Y5L4 95 aaPredicted RBP20.42■□□□□ 0.86
TRIM47-205ENST00000587774 PTPRDP23468 1912 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 ANAPC1Q9H1A4 1944 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 F5P12259 2224 aa20.42■□□□□ 0.86
TRIM47-205ENST00000587774 HELZP42694 1942 aaKnown RBP20.41■□□□□ 0.86
TRIM47-205ENST00000587774 TISP43B9A030 160 aa20.41■□□□□ 0.86
TRIM47-205ENST00000587774 XPOTO43592 962 aaKnown RBP20.41■□□□□ 0.86
TRIM47-205ENST00000587774 MARCKSP29966 332 aaPredicted RBP20.41■□□□□ 0.86
TRIM47-205ENST00000587774 GTF2BQ00403 316 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms