RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CNTN6Q9UQ52 1028 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 FAM170AA1A519 330 aa21.26■□□□□ 0.99
TRIM47-204ENST00000587339 FKTNO75072 461 aa21.26■□□□□ 0.99
TRIM47-204ENST00000587339 YARSP54577 528 aaKnown RBP21.26■□□□□ 0.99
TRIM47-204ENST00000587339 WHAMMP3Q1A5X7 153 aa21.26■□□□□ 0.99
TRIM47-204ENST00000587339 SERINC5Q86VE9 423 aa21.26■□□□□ 0.99
TRIM47-204ENST00000587339 SESTD1Q86VW0 696 aa21.26■□□□□ 0.99
TRIM47-204ENST00000587339 RBBP8NLQ8NC74 664 aaPredicted RBP21.26■□□□□ 0.99
TRIM47-204ENST00000587339 THAP2Q9H0W7 228 aa21.26■□□□□ 0.99
TRIM47-204ENST00000587339 CEP112Q8N8E3 955 aa21.25■□□□□ 0.99
TRIM47-204ENST00000587339 ZNF296Q8WUU4 475 aaPredicted RBP21.25■□□□□ 0.99
TRIM47-204ENST00000587339 RFFLQ8WZ73 363 aa21.25■□□□□ 0.99
TRIM47-204ENST00000587339 HES2Q9Y543 173 aa21.25■□□□□ 0.99
TRIM47-204ENST00000587339 CDY2AQ9Y6F7 541 aa21.25■□□□□ 0.99
TRIM47-204ENST00000587339 THSD7BQ9C0I4 1608 aa21.25■□□□□ 0.99
TRIM47-204ENST00000587339 DNAH12Q6ZR08 3092 aa21.25■□□□□ 0.99
TRIM47-204ENST00000587339 GRID2IPA4D2P6 1211 aa21.25■□□□□ 0.99
TRIM47-204ENST00000587339 KIF12Q96FN5 646 aa21.25■□□□□ 0.99
TRIM47-204ENST00000587339 NXF3Q9H4D5 531 aaKnown RBP21.25■□□□□ 0.99
TRIM47-204ENST00000587339 NXF1Q9UBU9 619 aaKnown RBP21.25■□□□□ 0.99
TRIM47-204ENST00000587339 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.25■□□□□ 0.997e-7■■□□□ 13
TRIM47-204ENST00000587339 SNX12Q9UMY4 172 aa21.25■□□□□ 0.99
TRIM47-204ENST00000587339 TRPV2Q9Y5S1 764 aa21.25■□□□□ 0.99
TRIM47-204ENST00000587339 V9GYY5 206 aaPredicted RBP21.25■□□□□ 0.99
TRIM47-204ENST00000587339 NCANO14594 1321 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 EFCAB8A8MWE9 144 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 SRGAP2O75044 1071 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 CALCAP01258 141 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 RPLP2P05387 115 aaKnown RBP21.24■□□□□ 0.99
TRIM47-204ENST00000587339 CD58P19256 250 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 GNA15P30679 374 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 ASPAP45381 313 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 NAA30Q147X3 362 aaPredicted RBP21.24■□□□□ 0.99
TRIM47-204ENST00000587339 WDR72Q3MJ13 1102 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 ZNF667Q5HYK9 610 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 UBR7Q8N806 425 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 CXorf38Q8TB03 319 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 SLC35G2Q8TBE7 412 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 CISHQ9NSE2 258 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 ITGA11Q9UKX5 1188 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 GRIN2DO15399 1336 aa21.24■□□□□ 0.99
TRIM47-204ENST00000587339 TFRCP02786 760 aaKnown RBP21.23■□□□□ 0.99
TRIM47-204ENST00000587339 WEE2P0C1S8 567 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 PRLRP16471 622 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 ATICP31939 592 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 SCARA5Q6ZMJ2 495 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 FAM228AQ86W67 206 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 SLAIN1Q8ND83 568 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 TPCN2Q8NHX9 752 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 WNT8BQ93098 351 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 FAXDC2Q96IV6 333 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 SNX27Q96L92 541 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 PDCL3Q9H2J4 239 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 DPP3Q9NY33 737 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 PUF60Q9UHX1 559 aaKnown RBP21.23■□□□□ 0.99
TRIM47-204ENST00000587339 TSKSQ9UJT2 592 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 DERAQ9Y315 318 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 NOC2LQ9Y3T9 749 aaKnown RBP21.23■□□□□ 0.99
TRIM47-204ENST00000587339 TADA3O75528 432 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 CABYRO75952 493 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 FTCDO95954 541 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 INHAP05111 366 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 POLR2BP30876 1174 aaKnown RBP21.23■□□□□ 0.99
TRIM47-204ENST00000587339 GPC5P78333 572 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 PTGISQ16647 500 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 RHOT2Q8IXI1 618 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 UBXN4Q92575 508 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 ARHGEF26Q96DR7 871 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 TLR10Q9BXR5 811 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 OSGEPQ9NPF4 335 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 SAGE1Q9NXZ1 904 aa21.23■□□□□ 0.99
TRIM47-204ENST00000587339 RECQL4O94761 1208 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 CTSHP09668 335 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 ZNF132P52740 706 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 YWHAEP62258 255 aaKnown RBP21.22■□□□□ 0.99
TRIM47-204ENST00000587339 RPAINQ86UA6 219 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 TMEM130Q8N3G9 435 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 LRRC57Q8N9N7 239 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 APOL6Q9BWW8 343 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 VRTNQ9H8Y1 702 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 AGAP1Q9UPQ3 857 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 HYOU1Q9Y4L1 999 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 MYH10P35580 1976 aa21.22■□□□□ 0.99
TRIM47-204ENST00000587339 NCK2O43639 380 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 RPS6KA5O75582 802 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 TCP1P17987 556 aaKnown RBP21.21■□□□□ 0.99
TRIM47-204ENST00000587339 GUCY2FP51841 1108 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 ACLYP53396 1101 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 PRMT2P55345 433 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 RBP5P82980 135 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 ITGA7Q13683 1181 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 CLEC16AQ2KHT3 1053 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 ERCC6LQ2NKX8 1250 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 UBXN11Q5T124 520 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 MEI1Q5TIA1 1274 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 SMYD5Q6GMV2 418 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 TWF2Q6IBS0 349 aaKnown RBP21.21■□□□□ 0.99
TRIM47-204ENST00000587339 ACAD10Q6JQN1 1059 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 HPDLQ96IR7 371 aa21.21■□□□□ 0.99
TRIM47-204ENST00000587339 SENP6Q9GZR1 1112 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms