RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 LMNB2Q03252 620 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 DMWDQ09019 674 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 TRIM29Q14134 588 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 IL17AQ16552 155 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 LPAL2Q16609 132 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 SLC10A6Q3KNW5 377 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 SEZ6Q53EL9 994 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 TTC38Q5R3I4 469 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 RNF19BQ6ZMZ0 732 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 SHKBP1Q8TBC3 707 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 SMARCD2Q92925 531 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 CCDC94Q9BW85 323 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-225ENST00000586385 CRISPLD1Q9H336 500 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 TMEM134Q9H6X4 195 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 TRPV4Q9HBA0 871 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 TRPV5Q9NQA5 729 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 TOPORSQ9NS56 1045 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-225ENST00000586385 DDX19AQ9NUU7 478 aaKnown RBP13.02□□□□□ -0.33
BRCA1-225ENST00000586385 SLC38A7Q9NVC3 462 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 C2orf42Q9NWW7 574 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 TUBGCP4Q9UGJ1 667 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 AFF4Q9UHB7 1163 aaKnown RBP13.02□□□□□ -0.33
BRCA1-225ENST00000586385 MRPS17Q9Y2R5 130 aaKnown RBP13.02□□□□□ -0.33
BRCA1-225ENST00000586385 TRIP11Q15643 1979 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 CCDC169A6NNP5 214 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 ZNF197O14709 1029 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 HIP1RO75146 1068 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 MCF2P10911 925 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 PSMC3P17980 439 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 ELF1P32519 619 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 RPL9P32969 192 aaKnown RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 TOB1P50616 345 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 NEK4P51957 841 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 YARSP54577 528 aaKnown RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 SATB1Q01826 763 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 TWF1Q12792 350 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 ORC2Q13416 577 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 TEAD2Q15562 447 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 CTXN3Q4LDR2 81 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 TPGS2Q68CL5 300 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 HAUS3Q68CZ6 603 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 C1orf186Q6ZWK4 172 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 PDZD4Q76G19 769 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 TMC8Q8IU68 726 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 GPR161Q8N6U8 529 aaKnown RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 IGSF22Q8N9C0 903 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 BEST2Q8NFU1 509 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 ZSCAN18Q8TBC5 510 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 FAM3CQ92520 227 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 DDX12PQ92771 950 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 LRRC3BQ96PB8 259 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 MMTAG2Q9BU76 263 aaKnown RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 MRPL4Q9BYD3 311 aaKnown RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 FAM126AQ9BYI3 521 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 HAPLN2Q9GZV7 340 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 DNAJC25Q9H1X3 360 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 FOXP1Q9H334 677 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 LMAN1LQ9HAT1 526 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 USP18Q9UMW8 372 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 PIAS3Q9Y6X2 628 aa13.01□□□□□ -0.33
BRCA1-225ENST00000586385 KMT2BQ9UMN6 2715 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-225ENST00000586385 SFI1A8K8P3 1242 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 PRR5-ARHGAP8B1AHC4 643 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 H7C4K7 107 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 MAN2B1O00754 1011 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 HRO43593 1189 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 OR4Q2P0C623 313 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 MYL4P12829 197 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 CCNE1P24864 410 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 CDC25AP30304 524 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 SOX9P48436 509 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 ARHGAP8P85298 464 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 SPEM2Q0P670 501 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 STXBP5Q5T5C0 1151 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 RINT1Q6NUQ1 792 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 MPZL3Q6UWV2 235 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 FBXO18Q8NFZ0 1043 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 IRF7Q92985 503 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 C8orf76Q96K31 380 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 ACAP3Q96P50 834 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 MKNK1Q9BUB5 465 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 RBM12Q9NTZ6 932 aaKnown RBP13□□□□□ -0.33
BRCA1-225ENST00000586385 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
BRCA1-225ENST00000586385 LRWD1Q9UFC0 647 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 CDV3Q9UKY7 258 aaKnown RBP13□□□□□ -0.33
BRCA1-225ENST00000586385 YIPF1Q9Y548 306 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 NUB1Q9Y5A7 615 aa13□□□□□ -0.33
BRCA1-225ENST00000586385 DYNC1LI1Q9Y6G9 523 aaKnown RBP13□□□□□ -0.33
BRCA1-225ENST00000586385 HEPACAM2A8MVW5 462 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 K7ESF4 209 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 M0QZQ0 153 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 SLC16A4O15374 487 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 HARSP12081 509 aaKnown RBP12.99□□□□□ -0.33
BRCA1-225ENST00000586385 MCM4P33991 863 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 AARSP49588 968 aaKnown RBP eCLIP12.99□□□□□ -0.33
BRCA1-225ENST00000586385 SPAG1Q07617 926 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 SRSF5Q13243 272 aaKnown RBP12.99□□□□□ -0.33
BRCA1-225ENST00000586385 SAFBQ15424 915 aaKnown RBP eCLIP12.99□□□□□ -0.33
BRCA1-225ENST00000586385 CYP4A22Q5TCH4 519 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms