RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 HSD3B7Q9H2F3 369 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 SPG21Q9NZD8 308 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 LIMA1Q9UHB6 759 aaKnown RBP14.69□□□□□ -0.06
VMP1-203ENST00000586245 NUB1Q9Y5A7 615 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 PDCD11Q14690 1871 aaKnown RBP14.69□□□□□ -0.06
VMP1-203ENST00000586245 NT5C1B-RDH14C9J2C7 533 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 TMEM189-UBE2V1I3L0A0 370 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 PIRO00625 290 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 P4HA2O15460 535 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 TADA2AO75478 443 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 ATP1A3P13637 1013 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 PAX3P23760 479 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 FMO5P49326 533 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 TAF6P49848 677 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 MYL7Q01449 175 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 MYO1EQ12965 1108 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 NCOA4Q13772 614 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 CBWD6Q4V339 395 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 VWA3BQ502W6 1294 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 CBWD3Q5JTY5 395 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 CBWD5Q5RIA9 395 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 C15orf39Q6ZRI6 1047 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 SLC39A11Q8N1S5 342 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 TMEM130Q8N3G9 435 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 LRRC52Q8N7C0 313 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 CCDC150Q8NCX0 1101 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 TMEM169Q96HH4 297 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 PLVAPQ9BX97 442 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 VPS16Q9H269 839 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 NDST4Q9H3R1 872 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 TAB2Q9NYJ8 693 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 SIX4Q9UIU6 781 aa14.68□□□□□ -0.06
VMP1-203ENST00000586245 RANBP2P49792 3224 aaKnown RBP14.68□□□□□ -0.06
VMP1-203ENST00000586245 PMM2O15305 246 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 TRAPPC3O43617 180 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 ARHGEF15O94989 841 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 KIF4AO95239 1232 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 SERPINC1P01008 464 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 CST3P01034 146 aaPredicted RBP14.67□□□□□ -0.06
VMP1-203ENST00000586245 HLA-DRAP01903 254 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 RB1P06400 928 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 LINC00271P0C7V0 271 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 ATICP31939 592 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 COPB1P53618 953 aaKnown RBP14.67□□□□□ -0.06
VMP1-203ENST00000586245 ERVK-21P61565 698 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 TAP1Q03518 808 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 KRT17Q04695 432 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 SV2CQ496J9 727 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 FILIP1LQ4L180 1135 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 EPC2Q52LR7 807 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 FBXL13Q8NEE6 735 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 HASPINQ8TF76 798 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 IGSF21Q96ID5 467 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 C17orf80Q9BSJ5 609 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 IMPG2Q9BZV3 1241 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 ADAM28Q9UKQ2 775 aa14.67□□□□□ -0.06
VMP1-203ENST00000586245 SF3B1O75533 1304 aaKnown RBP eCLIP14.66□□□□□ -0.062e-7■■■■■ 143.6
VMP1-203ENST00000586245 GBF1Q92538 1859 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 LRRC10BA6NIK2 292 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 PPEF2O14830 753 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 FGF18O76093 207 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 VNN1O95497 513 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 MYL6P60660 151 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 SGSM1Q2NKQ1 1148 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 ZNF699Q32M78 642 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 WDR44Q5JSH3 913 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 MIIPQ5JXC2 388 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 FKBP15Q5T1M5 1219 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 DSTYKQ6XUX3 929 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 GAS2L3Q86XJ1 694 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 KLHL23Q8NBE8 558 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 FBXO22Q8NEZ5 403 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 CXorf38Q8TB03 319 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 TAS1R2Q8TE23 839 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 TAF4BQ92750 862 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 HPDLQ96IR7 371 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 C11orf84Q9BUA3 381 aaPredicted RBP14.66□□□□□ -0.06
VMP1-203ENST00000586245 RBSNQ9H1K0 784 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 MARCH5Q9NX47 278 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 RAB20Q9NX57 234 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 STK39Q9UEW8 545 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 PUF60Q9UHX1 559 aaKnown RBP14.66□□□□□ -0.06
VMP1-203ENST00000586245 MTUS1Q9ULD2 1270 aa14.66□□□□□ -0.06
VMP1-203ENST00000586245 ARHGEF37A1IGU5 675 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 KPNA7A9QM74 516 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 C5orf67F2Z3F1 127 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 F8W810 466 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 STAU1O95793 577 aaKnown RBP14.65□□□□□ -0.06
VMP1-203ENST00000586245 LILRA4P59901 499 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 FANCCQ00597 558 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 PLCB3Q01970 1234 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 ELAVL2Q12926 359 aaKnown RBP14.65□□□□□ -0.06
VMP1-203ENST00000586245 FUT10Q6P4F1 479 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 GBP6Q6ZN66 633 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 TMEM173Q86WV6 379 aaPredicted RBP14.65□□□□□ -0.06
VMP1-203ENST00000586245 PIAS4Q8N2W9 510 aaPredicted RBP14.65□□□□□ -0.06
VMP1-203ENST00000586245 C3orf58Q8NDZ4 430 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 BCL7CQ8WUZ0 217 aaPredicted RBP14.65□□□□□ -0.06
VMP1-203ENST00000586245 ARNTL2Q8WYA1 636 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 CERS4Q9HA82 394 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms