RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 FNIP2Q9P278 1114 aa12.57□□□□□ -0.4
LRFN3-202ENST00000585876 COG5Q9UP83 839 aa12.57□□□□□ -0.4
LRFN3-202ENST00000585876 MAPK8IP1Q9UQF2 711 aa12.57□□□□□ -0.4
LRFN3-202ENST00000585876 MUC3AQ02505 3323 aa12.57□□□□□ -0.4
LRFN3-202ENST00000585876 PSMA7O14818 248 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 EXOC3O60645 756 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 CXCL14O95715 111 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 GLP2RO95838 553 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 MBD3O95983 291 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 NR2F2P24468 414 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 IGFBP6P24592 240 aaPredicted RBP12.56□□□□□ -0.4
LRFN3-202ENST00000585876 RPL13P26373 211 aaKnown RBP12.56□□□□□ -0.4
LRFN3-202ENST00000585876 LTBRP36941 435 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 NRIP1P48552 1158 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 ADAM15Q13444 863 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 STIM1Q13586 685 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 CCDC85BQ15834 202 aaPredicted RBP12.56□□□□□ -0.4
LRFN3-202ENST00000585876 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 RBM43Q6ZSC3 357 aaKnown RBP12.56□□□□□ -0.4
LRFN3-202ENST00000585876 LRRC52Q8N7C0 313 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 C1orf127Q8N9H9 656 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 MICAL1Q8TDZ2 1067 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 CACTINQ8WUQ7 758 aaKnown RBP12.56□□□□□ -0.4
LRFN3-202ENST00000585876 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 DHTKD1Q96HY7 919 aaPredicted RBP12.56□□□□□ -0.4
LRFN3-202ENST00000585876 CGRRF1Q99675 332 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 TTPALQ9BTX7 342 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 MKNK1Q9BUB5 465 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 NUP62CLQ9H1M0 184 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 TLE6Q9H808 572 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 INTS13Q9NVM9 706 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 DPP3Q9NY33 737 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 THEGQ9P2T0 379 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 ITGA11Q9UKX5 1188 aa12.56□□□□□ -0.4
LRFN3-202ENST00000585876 PTPRDP23468 1912 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 PPEF2O14830 753 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 TBX10O75333 385 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 ADH1AP07327 375 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 CNPP09543 421 aaKnown RBP12.55□□□□□ -0.4
LRFN3-202ENST00000585876 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
LRFN3-202ENST00000585876 CCNE1P24864 410 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 GTF2F1P35269 517 aaKnown RBP eCLIP12.55□□□□□ -0.4
LRFN3-202ENST00000585876 PNPLA4P41247 253 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 NDUFV1P49821 464 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 GUCY2FP51841 1108 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 LILRA4P59901 499 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 TFAMQ00059 246 aaKnown RBP12.55□□□□□ -0.4
LRFN3-202ENST00000585876 PLCB2Q00722 1185 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 MRPL58Q14197 206 aaKnown RBP12.55□□□□□ -0.4
LRFN3-202ENST00000585876 CAMK4Q16566 473 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 PPFIBP1Q86W92 1011 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 TMEM130Q8N3G9 435 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 VN1R2Q8NFZ6 395 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 LNX1Q8TBB1 728 aaPredicted RBP12.55□□□□□ -0.4
LRFN3-202ENST00000585876 TMC2Q8TDI7 906 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 PARD3BQ8TEW8 1205 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 SLC22A17Q8WUG5 538 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 AUTS2Q8WXX7 1259 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 HLA-CQ95604 372 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 B3GALT6Q96L58 329 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 EMILIN2Q9BXX0 1053 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 MTMR12Q9C0I1 747 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 UBE2ZQ9H832 354 aaPredicted RBP12.55□□□□□ -0.4
LRFN3-202ENST00000585876 MTRRQ9UBK8 725 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 SIX4Q9UIU6 781 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 PCDHB8Q9UN66 801 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 NUB1Q9Y5A7 615 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 BACE2Q9Y5Z0 518 aa12.55□□□□□ -0.4
LRFN3-202ENST00000585876 SLC16A3O15427 465 aaKnown RBP12.54□□□□□ -0.4
LRFN3-202ENST00000585876 TEX28O15482 410 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 TBC1D4O60343 1298 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 CLASP2O75122 1294 aaKnown RBP12.54□□□□□ -0.4
LRFN3-202ENST00000585876 AKAP3O75969 853 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 CSPG5O95196 566 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 PAPLNO95428 1278 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 CYP11A1P05108 521 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 TKTP29401 623 aaKnown RBP12.54□□□□□ -0.4
LRFN3-202ENST00000585876 MCM4P33991 863 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 BRCC3P46736 316 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 CASP4P49662 377 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 AP3M2P53677 418 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 PSMD5Q16401 504 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 DUOXA2Q1HG44 320 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 KIAA1841Q6NSI8 718 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 TTI2Q6NXR4 508 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
LRFN3-202ENST00000585876 OR5B17Q8NGF7 314 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 PLEKHO2Q8TD55 490 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
LRFN3-202ENST00000585876 PPM1EQ8WY54 764 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 RIN2Q8WYP3 895 aaPredicted RBP12.54□□□□□ -0.4
LRFN3-202ENST00000585876 BORCS6Q96GS4 357 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 MSLNLQ96KJ4 702 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 ZNF560Q96MR9 790 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 KLHL5Q96PQ7 755 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 FRMD4BQ9Y2L6 1034 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 HCFC2Q9Y5Z7 792 aa12.54□□□□□ -0.4
LRFN3-202ENST00000585876 ARHGEF37A1IGU5 675 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms