RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 RBAK-RBAKDNI3L0D1 243 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 SGK1O00141 431 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 PPP1R37O75864 691 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 TGFB3P10600 412 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 PYGMP11217 842 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 IFRD2Q12894 506 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 CUL1Q13616 776 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 PPP2R5EQ16537 467 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 ZSWIM1Q9BR11 485 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 MROH8Q9H579 483 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 KLK14Q9P0G3 267 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 HESX1Q9UBX0 185 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 POLIQ9UNA4 740 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 NUB1Q9Y5A7 615 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 CETPP11597 493 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 KIF22Q14807 665 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 SYCP2LQ5T4T6 812 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 SLC39A4Q6P5W5 647 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 JAMLQ86YT9 394 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 SHC3Q92529 594 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 FAM81BQ96LP2 452 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 MIS12Q9H081 205 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 VPS37BQ9H9H4 285 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 FAM49BQ9NUQ9 324 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 COG5Q9UP83 839 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 NR2E1Q9Y466 385 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 SNX9Q9Y5X1 595 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 NFASCO94856 1347 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 H3BRB1 525 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 GOLGA8MH3BSY2 632 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 IVLP07476 585 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 VIMP08670 466 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 ZNF157P51786 506 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 SURF1Q15526 300 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 CELF3Q5SZQ8 465 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 ALS2CLQ60I27 953 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 EXOC8Q8IYI6 725 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 FAM71AQ8IYT1 594 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 PKNOX2Q96KN3 472 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 CGRRF1Q99675 332 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 TUT1Q9H6E5 874 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 GBA2Q9HCG7 927 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 PGAP2Q9UHJ9 254 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 MYH11P35749 1972 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 PDE4DIPQ5VU43 2346 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 SPDYE5A6NIY4 337 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 CLTAP09496 248 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 CTSHP09668 335 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 KRT10P13645 584 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 ATP11AP98196 1134 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 RFX6Q8HWS3 928 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 CCDC89Q8N998 374 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 REPS2Q8NFH8 660 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 NIF3L1Q9GZT8 377 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 CARD9Q9H257 536 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 RNPEPQ9H4A4 650 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 RRAGCQ9HB90 399 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 CISHQ9NSE2 258 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 ABT1Q9ULW3 272 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 NR1D1P20393 614 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 PPIL2Q13356 520 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 PSMD6Q15008 389 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 SLITRK6Q9H5Y7 841 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 UVRAGQ9P2Y5 699 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 ANAPC5Q9UJX4 755 aa13.24□□□□□ -0.29
SMARCA4-208ENST00000585799 CST3P01034 146 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 PDGFRBP09619 1106 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 LAMC2Q13753 1193 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 HADHQ16836 314 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 SGSM1Q2NKQ1 1148 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 CCDC38Q502W7 563 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 BORCS6Q96GS4 357 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 CCDC77Q9BR77 488 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 ARHGAP28Q9P2N2 729 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 COL11A2P13942 1736 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 RALAP11233 206 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 KRT81Q14533 505 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 TWF2Q6IBS0 349 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 B3GNT9Q6UX72 402 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 EMC1Q8N766 993 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 RSAD2Q8WXG1 361 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 ACAP3Q96P50 834 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 MLXIPLQ9NP71 852 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 PIN4Q9Y237 131 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 SCINQ9Y6U3 715 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 POC1B-GALNT4F8VUJ3 575 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 MAP2K7O14733 419 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 STAG3L1P0CL83 205 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 GZMAP12544 262 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 ATP4AP20648 1035 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 GUCY1A3Q02108 690 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 KRT17Q04695 432 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 CLEC16AQ2KHT3 1053 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 BSPRYQ5W0U4 402 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 MPZL3Q6UWV2 235 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 TTC16Q8NEE8 873 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms