RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 RIN2Q8WYP3 895 aaPredicted RBP14.95□□□□□ -0.02
PRKCSH-202ENST00000585540 NECTIN4Q96NY8 510 aa14.95□□□□□ -0.02
PRKCSH-202ENST00000585540 POP1Q99575 1024 aaKnown RBP14.95□□□□□ -0.02
PRKCSH-202ENST00000585540 CXCL16Q9H2A7 254 aa14.95□□□□□ -0.02
PRKCSH-202ENST00000585540 KCTD10Q9H3F6 313 aa14.95□□□□□ -0.02
PRKCSH-202ENST00000585540 GOLGA2P5Q9HBQ8 144 aa14.95□□□□□ -0.02
PRKCSH-202ENST00000585540 MTRRQ9UBK8 725 aa14.95□□□□□ -0.02
PRKCSH-202ENST00000585540 TUBGCP4Q9UGJ1 667 aa14.95□□□□□ -0.02
PRKCSH-202ENST00000585540 DSEQ9UL01 958 aa14.95□□□□□ -0.02
PRKCSH-202ENST00000585540 GOLGA6L22H0YM25 854 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 PIRO00625 290 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 PER2O15055 1255 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 TEX28O15482 410 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 EXOC3O60645 756 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 CSPG5O95196 566 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 PAPLNO95428 1278 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 NFICP08651 508 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 TMEM191BP0C7N4 346 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 RPL13P26373 211 aaKnown RBP14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 HOXD13P35453 343 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 TAF6P49848 677 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 PNOCQ13519 176 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 STIM1Q13586 685 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 PSMD6Q15008 389 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 SNRNP35Q16560 246 aaKnown RBP14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 EDRF1Q3B7T1 1238 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 SV2CQ496J9 727 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 RTP2Q5QGT7 225 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 ZNF658Q5TYW1 1059 aaPredicted RBP14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 PTCRAQ6ISU1 281 aaPredicted RBP14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 CES5AQ6NT32 575 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 FOXR2Q6PJQ5 311 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 C15orf39Q6ZRI6 1047 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 EP400NLQ6ZTU2 488 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 TRIML1Q8N9V2 468 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 C3orf58Q8NDZ4 430 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 LNX1Q8TBB1 728 aaPredicted RBP14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 HASPINQ8TF76 798 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 SLC22A17Q8WUG5 538 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 C18orf25Q96B23 403 aaPredicted RBP14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 SAAL1Q96ER3 474 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 FNBP1Q96RU3 617 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 PRDM6Q9NQX0 595 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 ZDHHC7Q9NXF8 308 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 CLEC1BQ9P126 229 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 PCDHGC5Q9Y5F6 944 aa14.94□□□□□ -0.02
PRKCSH-202ENST00000585540 GRXCR2A6NFK2 248 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 F8W810 466 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 MBTPS2O43462 519 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 TNNC2P02585 160 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 POU2F2P09086 479 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 ODC1P11926 461 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 HOXA9P31269 272 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 GTF2F1P35269 517 aaKnown RBP eCLIP14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 MTHFRP42898 656 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 SMAD2Q15796 467 aaKnown RBP14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 C9orf57Q5W0N0 161 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 SLC8B1Q6J4K2 584 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 CD300LGQ6UXG3 332 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 CEP57Q86XR8 500 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 EFCAB13Q8IY85 973 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 AUTS2Q8WXX7 1259 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 ERCC4Q92889 916 aaPredicted RBP14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 RIPOR3Q96MK2 946 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 IKZF4Q9H2S9 585 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 PCIF1Q9H4Z3 704 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 DMAC2Q9NW81 257 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 DPP3Q9NY33 737 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 FRMD4BQ9Y2L6 1034 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 VWA8A3KMH1 1905 aa14.93□□□□□ -0.02
PRKCSH-202ENST00000585540 COL6A3P12111 3177 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 C2CD2LO14523 706 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 LINC01565O15544 149 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 CYP11A1P05108 521 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 BMP1P13497 986 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 YWHAHQ04917 246 aaPredicted RBP14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 CYP24A1Q07973 514 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 RAB33AQ14088 237 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 MRPL58Q14197 206 aaKnown RBP14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 DUOXA2Q1HG44 320 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 UVSSAQ2YD98 709 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 VARS2Q5ST30 1063 aaKnown RBP14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 DSTYKQ6XUX3 929 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 TAS1R1Q7RTX1 841 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 VN1R2Q8NFZ6 395 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 CGRRF1Q99675 332 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 TSG101Q99816 390 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 MKNK1Q9BUB5 465 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 INTS13Q9NVM9 706 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 FBXW11Q9UKB1 542 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 BARX2Q9UMQ3 279 aaPredicted RBP14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 PCDHA5Q9Y5H7 936 aa14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 MTCL1Q9Y4B5 1905 aaKnown RBP14.92□□□□□ -0.02
PRKCSH-202ENST00000585540 GOLGA8IPA6NC78 632 aa14.91□□□□□ -0.02
PRKCSH-202ENST00000585540 OR6C75A6NL08 312 aa14.91□□□□□ -0.02
PRKCSH-202ENST00000585540 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
PRKCSH-202ENST00000585540 GOLGA8JA6NMD2 632 aa14.91□□□□□ -0.02
PRKCSH-202ENST00000585540 H3BQ06 376 aaPredicted RBP14.91□□□□□ -0.02
PRKCSH-202ENST00000585540 CLIC2O15247 247 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms