RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 SPATA1Q5VX52 437 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 C15orf39Q6ZRI6 1047 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 GPR149Q86SP6 731 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 TMEM130Q8N3G9 435 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 HPS3Q969F9 1004 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 TRIM44Q96DX7 344 aaPredicted RBP9.38□□□□□ -0.91
ATG4D-202ENST00000585437 SUSD3Q96L08 255 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 NECTIN4Q96NY8 510 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 NUP62CLQ9H1M0 184 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 POMKQ9H5K3 350 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 ASB7Q9H672 318 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 TMEM206Q9H813 350 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 RPF1Q9H9Y2 349 aaKnown RBP9.38□□□□□ -0.91
ATG4D-202ENST00000585437 USP25Q9UHP3 1055 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 FBXW11Q9UKB1 542 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 EXOC7Q9UPT5 735 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 C2CD2Q9Y426 696 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 BACE2Q9Y5Z0 518 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 NUP210Q8TEM1 1887 aaPredicted RBP9.38□□□□□ -0.91
ATG4D-202ENST00000585437 MYO10Q9HD67 2058 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 GREB1Q4ZG55 1949 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 KIF26AQ9ULI4 1882 aaPredicted RBP9.37□□□□□ -0.91
ATG4D-202ENST00000585437 A0A1B0GVL5 298 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 PVALEFA0A1B0GWK0 134 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 ANO9A1A5B4 782 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 PI4K2BG5E9Z4 385 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 I3L4J1 428 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 M0QZQ0 153 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 KIAA0391O15091 583 aaKnown RBP9.37□□□□□ -0.91
ATG4D-202ENST00000585437 ADAM12O43184 909 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 XPOTO43592 962 aaKnown RBP9.37□□□□□ -0.91
ATG4D-202ENST00000585437 TBC1D4O60343 1298 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 MYL1P05976 194 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 NFICP08651 508 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 RPL17P18621 184 aaKnown RBP9.37□□□□□ -0.91
ATG4D-202ENST00000585437 CASP1P29466 404 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 MTHFRP42898 656 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 ACOT2P49753 483 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 SPAG1Q07617 926 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 CUL4BQ13620 913 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 MRPL58Q14197 206 aaKnown RBP9.37□□□□□ -0.91
ATG4D-202ENST00000585437 POSTNQ15063 836 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 UVSSAQ2YD98 709 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 RARS2Q5T160 578 aaKnown RBP9.37□□□□□ -0.91
ATG4D-202ENST00000585437 JADE1Q6IE81 842 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 SLC8B1Q6J4K2 584 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 CES5AQ6NT32 575 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 RSPO2Q6UXX9 243 aaPredicted RBP9.37□□□□□ -0.91
ATG4D-202ENST00000585437 CYP26C1Q6V0L0 522 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 ANKS3Q6ZW76 656 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 NT5DC4Q86YG4 428 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 BRSK2Q8IWQ3 736 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 EFCAB13Q8IY85 973 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 C12orf76Q8N812 135 aaPredicted RBP9.37□□□□□ -0.91
ATG4D-202ENST00000585437 ZSWIM2Q8NEG5 633 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 ZNF507Q8TCN5 953 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 SCFD1Q8WVM8 642 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 POMGNT1Q8WZA1 660 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 ZNF707Q96C28 371 aaPredicted RBP9.37□□□□□ -0.91
ATG4D-202ENST00000585437 KIF12Q96FN5 646 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 CBWD1Q9BRT8 395 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 PLEKHA4Q9H4M7 779 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 ZDHHC7Q9NXF8 308 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 DPP7Q9UHL4 492 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 SERTAD1Q9UHV2 236 aa9.37□□□□□ -0.91
ATG4D-202ENST00000585437 COL4A2P08572 1712 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 TECTAO75443 2155 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 PIRO00625 290 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 TGFB1I1O43294 461 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 PRPF6O94906 941 aaKnown RBP9.36□□□□□ -0.91
ATG4D-202ENST00000585437 IL18RAPO95256 599 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 LDHAP00338 332 aaKnown RBP9.36□□□□□ -0.91
ATG4D-202ENST00000585437 POU2F2P09086 479 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 CCDC192P0DO97 292 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 HOXA9P31269 272 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 NDUFA8P51970 172 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 WNT7BP56706 349 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 RAB33AQ14088 237 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 TMEM132DQ14C87 1099 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 VARS2Q5ST30 1063 aaKnown RBP9.36□□□□□ -0.91
ATG4D-202ENST00000585437 KANK3Q6NY19 840 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 ELMSAN1Q6PJG2 1045 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 TMC5Q6UXY8 1006 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 STXBP4Q6ZWJ1 553 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 C12orf56Q8IXR9 622 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 GRAMD1CQ8IYS0 662 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 CEP57L1Q8IYX8 460 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 CXorf38Q8TB03 319 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 SAAL1Q96ER3 474 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 PAGE5Q96GU1 130 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 RIPOR3Q96MK2 946 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 APOL5Q9BWW9 433 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 BLZF1Q9H2G9 400 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 GOLPH3LQ9H4A5 285 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 PCDHB8Q9UN66 801 aa9.36□□□□□ -0.91
ATG4D-202ENST00000585437 WDR27A2RRH5 827 aa9.35□□□□□ -0.91
ATG4D-202ENST00000585437 PPEF2O14830 753 aa9.35□□□□□ -0.91
ATG4D-202ENST00000585437 EXTL3O43909 919 aa9.35□□□□□ -0.91
ATG4D-202ENST00000585437 RFPL2O75678 378 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms