RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 CRELD2Q6UXH1 353 aaPredicted RBP29.46■■■□□ 2.31
SMARCD2-210ENST00000584400 GPD1LQ8N335 351 aa29.46■■■□□ 2.31
SMARCD2-210ENST00000584400 KREMEN2Q8NCW0 462 aa29.46■■■□□ 2.31
SMARCD2-210ENST00000584400 RPGRIP1Q96KN7 1286 aa29.46■■■□□ 2.31
SMARCD2-210ENST00000584400 RHOBTB2Q9BYZ6 727 aa29.46■■■□□ 2.31
SMARCD2-210ENST00000584400 GDPD2Q9HCC8 539 aa29.46■■■□□ 2.31
SMARCD2-210ENST00000584400 EXOC1Q9NV70 894 aa29.46■■■□□ 2.31
SMARCD2-210ENST00000584400 ZDHHC7Q9NXF8 308 aa29.46■■■□□ 2.31
SMARCD2-210ENST00000584400 LOC730098B7Z3J9 87 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 NFICP08651 508 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 ALADP13716 330 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 RAB33AQ14088 237 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 VARS2Q5ST30 1063 aaKnown RBP29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 LIN9Q5TKA1 542 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 HS2ST1Q7LGA3 356 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 BRSK2Q8IWQ3 736 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 GLIS3Q8NEA6 775 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 SAAL1Q96ER3 474 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 CBWD1Q9BRT8 395 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 KIAA1586Q9HCI6 787 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 RBAKQ9NYW8 714 aaPredicted RBP29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 CGNQ9P2M7 1197 aaKnown RBP29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 PCDHB8Q9UN66 801 aa29.45■■■□□ 2.31
SMARCD2-210ENST00000584400 CITO14578 2027 aa29.44■■■□□ 2.3
SMARCD2-210ENST00000584400 CCDC195A0A1B0GUA6 201 aa29.44■■■□□ 2.3
SMARCD2-210ENST00000584400 ARHGEF37A1IGU5 675 aa29.44■■■□□ 2.3
SMARCD2-210ENST00000584400 OR1D2P34982 312 aa29.44■■■□□ 2.3
SMARCD2-210ENST00000584400 GRAMD1CQ8IYS0 662 aa29.44■■■□□ 2.3
SMARCD2-210ENST00000584400 OXCT2Q9BYC2 517 aaPredicted RBP29.44■■■□□ 2.3
SMARCD2-210ENST00000584400 SLC39A2Q9NP94 309 aa29.44■■■□□ 2.3
SMARCD2-210ENST00000584400 CDY1Q9Y6F8 540 aa29.44■■■□□ 2.3
SMARCD2-210ENST00000584400 SPATA31D3P0C874 917 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 ZNF280DQ6N043 979 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 KANK3Q6NY19 840 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 DSTYKQ6XUX3 929 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 SPATA31D4Q6ZUB0 917 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 RTL10Q7L3V2 364 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 NOC3LQ8WTT2 800 aaKnown RBP29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 CACTINQ8WUQ7 758 aaKnown RBP29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 SCFD1Q8WVM8 642 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 PCIF1Q9H4Z3 704 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 POMKQ9H5K3 350 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 DPP3Q9NY33 737 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 FBXW11Q9UKB1 542 aa29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 CIZ1Q9ULV3 898 aaPredicted RBP29.43■■■□□ 2.3
SMARCD2-210ENST00000584400 M0QZQ0 153 aa29.42■■■□□ 2.3
SMARCD2-210ENST00000584400 TULP1O00294 542 aaPredicted RBP29.42■■■□□ 2.3
SMARCD2-210ENST00000584400 AARSP49588 968 aaKnown RBP eCLIP29.42■■■□□ 2.3
SMARCD2-210ENST00000584400 SURF1Q15526 300 aa29.42■■■□□ 2.3
SMARCD2-210ENST00000584400 BMT2Q1RMZ1 405 aa29.42■■■□□ 2.3
SMARCD2-210ENST00000584400 C9orf57Q5W0N0 161 aa29.42■■■□□ 2.3
SMARCD2-210ENST00000584400 SLC8B1Q6J4K2 584 aa29.42■■■□□ 2.3
SMARCD2-210ENST00000584400 USP37Q86T82 979 aa29.42■■■□□ 2.3
SMARCD2-210ENST00000584400 C1QTNF1Q9BXJ1 281 aa29.42■■■□□ 2.3
SMARCD2-210ENST00000584400 ZNF233A6NK53 670 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 ZMYND10O75800 440 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 ZNF202O95125 648 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 WEE2P0C1S8 567 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 GUCY2FP51841 1108 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 UVSSAQ2YD98 709 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 CTXN3Q4LDR2 81 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 KRBA2Q6ZNG9 492 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 CCDC149Q6ZUS6 474 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 GOLGA5Q8TBA6 731 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 PIDD1Q9HB75 910 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 USTQ9Y2C2 406 aa29.41■■■□□ 2.3
SMARCD2-210ENST00000584400 GOLGA8IPA6NC78 632 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 GOLGA8JA6NMD2 632 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 PI4K2BG5E9Z4 385 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 PIRO00625 290 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 KLRC4O43908 158 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 PAPLNO95428 1278 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 HNRNPA1P09651 372 aaKnown RBP eCLIP29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 HOXD13P35453 343 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 LILRA4P59901 499 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 YWHAHQ04917 246 aaPredicted RBP29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 MRPL58Q14197 206 aaKnown RBP29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 KNOP1Q1ED39 458 aaKnown RBP29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 KMT5BQ4FZB7 885 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 RNF135Q8IUD6 432 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 NELFCDQ8IXH7 590 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 ZNF461Q8TAF7 563 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 PRKD2Q9BZL6 878 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 TSHZ2Q9NRE2 1034 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 AGPAT3Q9NRZ7 376 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 HSPBP1Q9NZL4 362 aa29.4■■■□□ 2.3
SMARCD2-210ENST00000584400 ANO9A1A5B4 782 aa29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 ADAM12O43184 909 aa29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 DCXO43602 365 aa29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 RFPL2O75678 378 aa29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 KIF20AO95235 890 aa29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 C8AP07357 584 aa29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 ODC1P11926 461 aa29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 HOXA9P31269 272 aa29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 TFAMQ00059 246 aaKnown RBP29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 PPM1LQ5SGD2 360 aa29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 SMG7Q92540 1137 aaKnown RBP29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 ACSF2Q96CM8 615 aaPredicted RBP29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 CDH22Q9UJ99 828 aa29.39■■■□□ 2.3
SMARCD2-210ENST00000584400 TGFB1I1O43294 461 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms