RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 PRKD2Q9BZL6 878 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 MAGEF1Q9HAY2 307 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 USTQ9Y2C2 406 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.17■■□□□ 1.14
SS18-224ENST00000584083 H7C4K7 107 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 NFICP08651 508 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 COL9A1P20849 921 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 ADSSP30520 456 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 PPM1LQ5SGD2 360 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 SPATA1Q5VX52 437 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 OTOP3Q7RTS5 596 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 PLCD3Q8N3E9 789 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 APPL2Q8NEU8 664 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 ZNF707Q96C28 371 aaPredicted RBP22.17■■□□□ 1.14
SS18-224ENST00000584083 C7orf25Q9BPX7 421 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 PYM1Q9BRP8 204 aaKnown RBP22.17■■□□□ 1.14
SS18-224ENST00000584083 FAM213AQ9BRX8 229 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 RHOBTB2Q9BYZ6 727 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 ASB7Q9H672 318 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 TMEM206Q9H813 350 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 KCNH3Q9ULD8 1083 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 ATP6V1DQ9Y5K8 247 aa22.17■■□□□ 1.14
SS18-224ENST00000584083 DOCK6Q96HP0 2047 aa22.16■■□□□ 1.14
SS18-224ENST00000584083 C8AP07357 584 aa22.16■■□□□ 1.14
SS18-224ENST00000584083 ARPP19P56211 112 aa22.16■■□□□ 1.14
SS18-224ENST00000584083 PTPN21Q16825 1174 aa22.16■■□□□ 1.14
SS18-224ENST00000584083 CEP57L1Q8IYX8 460 aa22.16■■□□□ 1.14
SS18-224ENST00000584083 ZDHHC14Q8IZN3 488 aa22.16■■□□□ 1.14
SS18-224ENST00000584083 LEO1Q8WVC0 666 aaPredicted RBP22.16■■□□□ 1.14
SS18-224ENST00000584083 CHAMP1Q96JM3 812 aa22.16■■□□□ 1.14
SS18-224ENST00000584083 WDR6Q9NNW5 1121 aaKnown RBP22.16■■□□□ 1.14
SS18-224ENST00000584083 LIMD1Q9UGP4 676 aa22.16■■□□□ 1.14
SS18-224ENST00000584083 PCDHB8Q9UN66 801 aa22.16■■□□□ 1.14
SS18-224ENST00000584083 DERAQ9Y315 318 aa22.16■■□□□ 1.14
SS18-224ENST00000584083 CLUHO75153 1309 aa22.15■■□□□ 1.14
SS18-224ENST00000584083 PRR33A8MZF0 331 aa22.15■■□□□ 1.14
SS18-224ENST00000584083 AFMP43652 599 aa22.15■■□□□ 1.14
SS18-224ENST00000584083 ZXDAP98168 799 aa22.15■■□□□ 1.14
SS18-224ENST00000584083 CTXN3Q4LDR2 81 aa22.15■■□□□ 1.14
SS18-224ENST00000584083 CNNM4Q6P4Q7 775 aa22.15■■□□□ 1.14
SS18-224ENST00000584083 CRELD2Q6UXH1 353 aaPredicted RBP22.15■■□□□ 1.14
SS18-224ENST00000584083 DSTYKQ6XUX3 929 aa22.15■■□□□ 1.14
SS18-224ENST00000584083 SLC7A14Q8TBB6 771 aa22.15■■□□□ 1.14
SS18-224ENST00000584083 NOC3LQ8WTT2 800 aaKnown RBP22.15■■□□□ 1.14
SS18-224ENST00000584083 SAAL1Q96ER3 474 aa22.15■■□□□ 1.14
SS18-224ENST00000584083 BLZF1Q9H2G9 400 aa22.15■■□□□ 1.14
SS18-224ENST00000584083 IL18RAPO95256 599 aa22.14■■□□□ 1.13
SS18-224ENST00000584083 HNRNPA1P09651 372 aaKnown RBP eCLIP22.14■■□□□ 1.13
SS18-224ENST00000584083 GARTP22102 1010 aa22.14■■□□□ 1.13
SS18-224ENST00000584083 CASP1P29466 404 aa22.14■■□□□ 1.13
SS18-224ENST00000584083 POU5F1Q01860 360 aaKnown RBP22.14■■□□□ 1.13
SS18-224ENST00000584083 MRPL58Q14197 206 aaKnown RBP22.14■■□□□ 1.13
SS18-224ENST00000584083 FAM26FQ5R3K3 315 aa22.14■■□□□ 1.13
SS18-224ENST00000584083 ZNF280DQ6N043 979 aa22.14■■□□□ 1.13
SS18-224ENST00000584083 GLIS3Q8NEA6 775 aa22.14■■□□□ 1.13
SS18-224ENST00000584083 SERTAD1Q9UHV2 236 aa22.14■■□□□ 1.13
SS18-224ENST00000584083 FBXL5Q9UKA1 691 aa22.14■■□□□ 1.13
SS18-224ENST00000584083 POLIQ9UNA4 740 aa22.14■■□□□ 1.13
SS18-224ENST00000584083 C2CD2Q9Y426 696 aa22.14■■□□□ 1.13
SS18-224ENST00000584083 GOLGA8IPA6NC78 632 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 GOLGA8JA6NMD2 632 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 PPEF2O14830 753 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 CCL16O15467 120 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 PAPLNO95428 1278 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 LDHAP00338 332 aaKnown RBP22.13■■□□□ 1.13
SS18-224ENST00000584083 ASGR2P07307 311 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 CMA1P23946 247 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 GBP2P32456 591 aaPredicted RBP22.13■■□□□ 1.13
SS18-224ENST00000584083 ELF1P32519 619 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 ROR1Q01973 937 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 UVSSAQ2YD98 709 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 C9orf57Q5W0N0 161 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 SLC8B1Q6J4K2 584 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 ARMCX5Q6P1M9 558 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 TRIM67Q6ZTA4 783 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 UNC13DQ70J99 1090 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 USP37Q86T82 979 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 ZNF461Q8TAF7 563 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 CBWD1Q9BRT8 395 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 PCIF1Q9H4Z3 704 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 DPP3Q9NY33 737 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 TIMM13Q9Y5L4 95 aaPredicted RBP22.13■■□□□ 1.13
SS18-224ENST00000584083 TRIOO75962 3097 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 SCN1AP35498 2009 aa22.13■■□□□ 1.13
SS18-224ENST00000584083 TECTAO75443 2155 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 A0A1B0GVL5 298 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 M0QZQ0 153 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 TBC1D4O60343 1298 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 XYLBO75191 536 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 SLFN14P0C7P3 912 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 HOXA9P31269 272 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 YWHAHQ04917 246 aaPredicted RBP22.12■■□□□ 1.13
SS18-224ENST00000584083 GRASPQ7Z6J2 395 aaPredicted RBP22.12■■□□□ 1.13
SS18-224ENST00000584083 GRAMD1CQ8IYS0 662 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 ZSWIM2Q8NEG5 633 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 RBAKQ9NYW8 714 aaPredicted RBP22.12■■□□□ 1.13
SS18-224ENST00000584083 RAPGEFL1Q9UHV5 662 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 SORCS3Q9UPU3 1222 aa22.12■■□□□ 1.13
SS18-224ENST00000584083 WDR27A2RRH5 827 aa22.11■■□□□ 1.13
SS18-224ENST00000584083 TMEM221A6NGB7 291 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms