RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 SEC24AO95486 1093 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 ARF4P18085 180 aaPredicted RBP12.63□□□□□ -0.39
NUP85-224ENST00000583948 MPLP40238 635 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 RAP1GAPP47736 663 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 JAK3P52333 1124 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 ARPP19P56211 112 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 STK38Q15208 465 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 SRGAP1Q7Z6B7 1085 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 WDR5BQ86VZ2 330 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 TMEM130Q8N3G9 435 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 CCDC12Q8WUD4 166 aaPredicted RBP12.63□□□□□ -0.39
NUP85-224ENST00000583948 LRRC3BQ96PB8 259 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 EDEM2Q9BV94 578 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 CSRNP2Q9H175 543 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 KCNH3Q9ULD8 1083 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 HELZ2Q9BYK8 2649 aaKnown RBP12.63□□□□□ -0.39
NUP85-224ENST00000583948 SF3B1O75533 1304 aaKnown RBP eCLIP12.62□□□□□ -0.393e-6■■■■■ 137.9
NUP85-224ENST00000583948 GOLGA6L4A6NEF3 574 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 PATE3B3GLJ2 98 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 INO80B-WBP1J3KQ70 363 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 RPP40O75818 363 aaKnown RBP12.62□□□□□ -0.39
NUP85-224ENST00000583948 ERLIN2O94905 339 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 MBD3O95983 291 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 TKTP29401 623 aaKnown RBP12.62□□□□□ -0.39
NUP85-224ENST00000583948 HOXA9P31269 272 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 BRCC3P46736 316 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 UBE2HP62256 183 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 CDC42EP1Q00587 391 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 RAB33AQ14088 237 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 STXBP5Q5T5C0 1151 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 B3GNT9Q6UX72 402 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 CD300LGQ6UXG3 332 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 BLIDQ8IZY5 108 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 REXO1Q8N1G1 1221 aaKnown RBP12.62□□□□□ -0.39
NUP85-224ENST00000583948 DEFB124Q8NES8 71 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 ASAP3Q8TDY4 903 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 CEP170P1Q96L14 293 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 GZF1Q9H116 711 aaPredicted RBP12.62□□□□□ -0.39
NUP85-224ENST00000583948 GOLGA2P5Q9HBQ8 144 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 UBN1Q9NPG3 1134 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 GTSE1Q9NYZ3 720 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 GDE1Q9NZC3 331 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 PCDHA4Q9UN74 947 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 CLIC4Q9Y696 253 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 ABCA7Q8IZY2 2146 aa12.62□□□□□ -0.39
NUP85-224ENST00000583948 TRIP11Q15643 1979 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 ARID2Q68CP9 1835 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 FAM205CA6NFA0 338 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 HEPACAM2A8MVW5 462 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 hCG_1984214I3L0E3 225 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 ZNF263O14978 683 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 C1RP00736 705 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 CCDC192P0DO97 292 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 MYL4P12829 197 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 PTPN2P17706 415 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 PSMC3P17980 439 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 ATP2B1P20020 1258 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 SFNP31947 248 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 CDR1P51861 262 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 KPNA1P52294 538 aaPredicted RBP12.61□□□□□ -0.39
NUP85-224ENST00000583948 TNK2Q07912 1038 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 GRIK3Q13003 919 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 SF3A1Q15459 793 aaKnown RBP12.61□□□□□ -0.39
NUP85-224ENST00000583948 NAB2Q15742 525 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 KLHL40Q2TBA0 621 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 UAP1L1Q3KQV9 507 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 ZNF713Q8N859 430 aaPredicted RBP12.61□□□□□ -0.39
NUP85-224ENST00000583948 GPT2Q8TD30 523 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 GAB3Q8WWW8 586 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 PSPC1Q8WXF1 523 aaKnown RBP12.61□□□□□ -0.39
NUP85-224ENST00000583948 IRF7Q92985 503 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 RIT2Q99578 217 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 TRIM6Q9C030 488 aaPredicted RBP12.61□□□□□ -0.39
NUP85-224ENST00000583948 ZMYND12Q9H0C1 365 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 C6orf50Q9HD87 102 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 NOL7Q9UMY1 257 aaKnown RBP12.61□□□□□ -0.39
NUP85-224ENST00000583948 GIT1Q9Y2X7 761 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 CACNA1EQ15878 2313 aa12.61□□□□□ -0.39
NUP85-224ENST00000583948 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
NUP85-224ENST00000583948 SPAARA0A1B0GVQ0 90 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 YEATS4O95619 227 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 PRKCBP05771 671 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 CNR2P34972 360 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 ME1P48163 572 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 CREB5Q02930 508 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 CREMQ03060 361 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 MBTD1Q05BQ5 628 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
NUP85-224ENST00000583948 TUSC3Q13454 348 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 EMC2Q15006 297 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 TEAD2Q15562 447 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 NPY5RQ15761 445 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 COL28A1Q2UY09 1125 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 GLRA4Q5JXX5 417 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 NAIF1Q69YI7 327 aaPredicted RBP12.6□□□□□ -0.39
NUP85-224ENST00000583948 GALNT17Q6IS24 598 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 CAVIN1Q6NZI2 390 aaKnown RBP12.6□□□□□ -0.39
NUP85-224ENST00000583948 NOTUMQ6P988 496 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 PIK3AP1Q6ZUJ8 805 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 CACNA2D4Q7Z3S7 1137 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms