RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 POMCP01189 267 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 RBP5P82980 135 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 SOX4Q06945 474 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TRPC3Q13507 836 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 NCOA4Q13772 614 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 HERVK_113Q902F9 699 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ANP32BQ92688 251 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 GAS2L1Q99501 681 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 INTS2Q9H0H0 1204 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PLCB1Q9NQ66 1216 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 GCNT4Q9P109 453 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TUBGCP4Q9UGJ1 667 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ITGA11Q9UKX5 1188 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 INPP5FQ9Y2H2 1132 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ITIH6Q6UXX5 1313 aa17.62■□□□□ 0.41
CDK5RAP3-228ENST00000583363 CHD7Q9P2D1 2997 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 RALGAPA2Q2PPJ7 1873 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ANO9A1A5B4 782 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PIRO00625 290 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 UPP2O95045 317 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ITGB3P05106 788 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 LRPAP1P30533 357 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 GATMP50440 423 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 DEFB103AP81534 67 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 GRIK3Q13003 919 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 SGSM1Q2NKQ1 1148 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 KLHDC7AQ5VTJ3 777 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 SPECC1LQ69YQ0 1117 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ABI1Q8IZP0 508 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 URGCPQ8TCY9 931 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 RSPH1Q8WYR4 309 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PCMTD1Q96MG8 357 aaPredicted RBP17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 NUP58Q9BVL2 599 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 LSM14BQ9BX40 385 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 SIX2Q9NPC8 291 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 CXXC1Q9P0U4 656 aaPredicted RBP17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 AGAP1Q9UPQ3 857 aa17.61■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ZC3H11AO75152 810 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 DGKIO75912 1065 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 NOL4O94818 638 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 KRT19P08727 400 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 POLR2BP30876 1174 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ATICP31939 592 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 RPL9P32969 192 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PIK3CAP42336 1068 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 KCNJ6P48051 423 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 MYL6P60660 151 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ADGRE1Q14246 886 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 C9orf57Q5W0N0 161 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TRIM65Q6PJ69 517 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TMC6Q7Z403 805 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PI4K2AQ9BTU6 479 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TBC1D13Q9NVG8 400 aa17.6■□□□□ 0.41
CDK5RAP3-228ENST00000583363 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.6■□□□□ 0.411e-7■■□□□ 14.1
CDK5RAP3-228ENST00000583363 PDCD11Q14690 1871 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TBKBP1A7MCY6 615 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ZBBXA8MT70 800 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TNFRSF10AO00220 468 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 DDHD2O94830 711 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ASS1P00966 412 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 APBA1Q02410 837 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TBX2Q13207 712 aaPredicted RBP17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TUSC3Q13454 348 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 FIGNQ5HY92 759 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 WDR44Q5JSH3 913 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PHLDB3Q6NSJ2 640 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ZNF280BQ86YH2 543 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 DRC7Q8IY82 874 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 NEK11Q8NG66 645 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TAF4BQ92750 862 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TATDN2Q93075 761 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 ZNF689Q96CS4 500 aaPredicted RBP17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 DDX27Q96GQ7 796 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 XYLT2Q9H1B5 865 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 GOLGA2P5Q9HBQ8 144 aa17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 FAM207AQ9NSI2 230 aaPredicted RBP17.59■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PPEF2O14830 753 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 EPHB6O15197 1021 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 STAU1O95793 577 aaKnown RBP17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 DSC1Q08554 894 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 LRMPQ12912 555 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 RAB30Q15771 203 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 TMCO2Q7Z6W1 182 aaPredicted RBP17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 COLGALT2Q8IYK4 626 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 LRRC52Q8N7C0 313 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CCDC150Q8NCX0 1101 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 PHOSPHO2Q8TCD6 241 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ELMO3Q96BJ8 720 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 HPDLQ96IR7 371 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 PDLIM2Q96JY6 352 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NT5C1BQ96P26 610 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 EDEM3Q9BZQ6 932 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 TTYH3Q9C0H2 523 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 GANQ9H2C0 597 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NKX2-4Q9H2Z4 354 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 VRTNQ9H8Y1 702 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 APOBEC3GQ9HC16 384 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms