RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 GPR161Q8N6U8 529 aaKnown RBP11.99□□□□□ -0.49
GGA3-213ENST00000582486 TMEM40Q8WWA1 233 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 NIF3L1Q9GZT8 377 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 ASB7Q9H672 318 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 RNF186Q9NXI6 227 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 EHD2Q9NZN4 543 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 SIX4Q9UIU6 781 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 CNTN6Q9UQ52 1028 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 MROH7Q68CQ1 1323 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 BUB1BO60566 1050 aaPredicted RBP11.99□□□□□ -0.49
GGA3-213ENST00000582486 NPTXRO95502 500 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 RARBP10826 455 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 GNAT1P11488 350 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 ELNP15502 786 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 CD58P19256 250 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 HOXC8P31273 242 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 KYAT1Q16773 422 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 ZNF677Q86XU0 584 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 PDCL2Q8N4E4 241 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 UBR7Q8N806 425 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 RBBP8NLQ8NC74 664 aaPredicted RBP11.99□□□□□ -0.49
GGA3-213ENST00000582486 EIF2AQ9BY44 585 aaKnown RBP11.99□□□□□ -0.49
GGA3-213ENST00000582486 SMARCAL1Q9NZC9 954 aa11.99□□□□□ -0.49
GGA3-213ENST00000582486 ATMINO43313 823 aaPredicted RBP11.98□□□□□ -0.49
GGA3-213ENST00000582486 KPNA6O60684 536 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 ITGB3P05106 788 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 CFHP08603 1231 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 WEE2P0C1S8 567 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 GNA15P30679 374 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 SNX17Q15036 470 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 RPS6KA1Q15418 735 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 CLEC16AQ2KHT3 1053 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 ACAD10Q6JQN1 1059 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 SCARA5Q6ZMJ2 495 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 PEX26Q7Z412 305 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 RHOT2Q8IXI1 618 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 SYCE1Q8N0S2 351 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 MS4A14Q96JA4 679 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 MTG1Q9BT17 334 aaPredicted RBP11.98□□□□□ -0.49
GGA3-213ENST00000582486 SPC25Q9HBM1 224 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 CISHQ9NSE2 258 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 CTTNBP2NLQ9P2B4 639 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 NXF1Q9UBU9 619 aaKnown RBP11.98□□□□□ -0.49
GGA3-213ENST00000582486 TRPA1O75762 1119 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 KIF4AO95239 1232 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 RHOXF2BP0C7M4 288 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 UNGP13051 313 aaPredicted RBP11.98□□□□□ -0.49
GGA3-213ENST00000582486 H2AFXP16104 143 aaPredicted RBP11.98□□□□□ -0.49
GGA3-213ENST00000582486 CCND3P30281 292 aaPredicted RBP11.98□□□□□ -0.49
GGA3-213ENST00000582486 SSTR3P32745 418 aaPredicted RBP11.98□□□□□ -0.49
GGA3-213ENST00000582486 GRM5P41594 1212 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 ASPAP45381 313 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 GUCY2FP51841 1108 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 TMEM132DQ14C87 1099 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 NBPF20Q3BBV1 942 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 DCAF4L1Q3SXM0 396 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 ZNF394Q53GI3 561 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 NOTUMQ6P988 496 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 SLC27A1Q6PCB7 646 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 CXorf38Q8TB03 319 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 CPA5Q8WXQ8 436 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 CYFIP2Q96F07 1278 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 RHOXF2Q9BQY4 288 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 PARD6BQ9BYG5 372 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 UPF3AQ9H1J1 476 aaKnown RBP11.98□□□□□ -0.49
GGA3-213ENST00000582486 CXCL16Q9H2A7 254 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 ANKZF1Q9H8Y5 726 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 SNTG2Q9NY99 539 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 POLIQ9UNA4 740 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 HES2Q9Y543 173 aa11.98□□□□□ -0.49
GGA3-213ENST00000582486 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
GGA3-213ENST00000582486 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
GGA3-213ENST00000582486 ZNF132P52740 706 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 TUBB4BP68371 445 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 DMTNQ08495 405 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 PCBP1Q15365 356 aaKnown RBP eCLIP11.97□□□□□ -0.491e-10■□□□□ 8.9
GGA3-213ENST00000582486 WDR72Q3MJ13 1102 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 CCDC181Q5TID7 509 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 NT5DC3Q86UY8 548 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 NME8Q8N427 588 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 RPGRIP1Q96KN7 1286 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 ABCB6Q9NP58 842 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 STXBP5LQ9Y2K9 1186 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 KCNK3O14649 394 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 THAP12O43422 761 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 ADAMTS4O75173 837 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 CRYBB1P53674 252 aaPredicted RBP11.97□□□□□ -0.49
GGA3-213ENST00000582486 C2orf54Q08AI8 447 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 PASD1Q8IV76 773 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 REM2Q8IYK8 340 aaPredicted RBP11.97□□□□□ -0.49
GGA3-213ENST00000582486 TAF4BQ92750 862 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 ZNF653Q96CK0 615 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 XPNPEP3Q9NQH7 507 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 GTF2IRD1Q9UHL9 959 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 AMFRQ9UKV5 643 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 PIN4Q9Y237 131 aaKnown RBP11.97□□□□□ -0.49
GGA3-213ENST00000582486 C2CD2Q9Y426 696 aa11.97□□□□□ -0.49
GGA3-213ENST00000582486 CITO14578 2027 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 CYP1A1P04798 512 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms