RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 NCSTNQ92542 709 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 USP6NLQ92738 828 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 RMDN2Q96LZ7 410 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 SMC6Q96SB8 1091 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 MTRQ99707 1265 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 APBA2Q99767 749 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 PRMT1Q99873 361 aaKnown RBP7.97□□□□□ -1.13
TVP23C-208ENST00000581273 ERP44Q9BS26 406 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 RAB34Q9BZG1 259 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 TMEM60Q9H2L4 133 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 TMEM134Q9H6X4 195 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 PPCSQ9HAB8 311 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.97□□□□□ -1.133e-6■■■■■ 37.3
TVP23C-208ENST00000581273 FAM207AQ9NSI2 230 aaPredicted RBP7.97□□□□□ -1.13
TVP23C-208ENST00000581273 ATP8A2Q9NTI2 1148 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 ABCF3Q9NUQ8 709 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 FLRT1Q9NZU1 646 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 DLGAP2Q9P1A6 1054 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 ZBTB21Q9ULJ3 1066 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 TFR2Q9UP52 801 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 WDR37Q9Y2I8 494 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 ATP8A1Q9Y2Q0 1164 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 CHD9Q3L8U1 2897 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 DMDP11532 3685 aa7.97□□□□□ -1.13
TVP23C-208ENST00000581273 RLFQ13129 1914 aa7.96□□□□□ -1.13
TVP23C-208ENST00000581273 CCDC194A0A1B0GVG4 234 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 SMIM31A0A1B0GVY4 71 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 A8MXQ7 604 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 MIF4GDA9UHW6 222 aaKnown RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 NDC80O14777 642 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 ZSCAN9O15535 394 aaPredicted RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 GH2P01242 217 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 H2AFZP0C0S5 128 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 PDE6AP16499 860 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 MARK3P27448 753 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 TPP2P29144 1249 aaPredicted RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 CASP1P29466 404 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 STX2P32856 288 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 GUCY1A2P33402 732 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 MAN1A1P33908 653 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 MCAMP43121 646 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 CD151P48509 253 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 POLGP54098 1239 aaPredicted RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 YARSP54577 528 aaKnown RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 RTP1P59025 263 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 RAB15P59190 212 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 DYNLL1P63167 89 aaKnown RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 CCNA1P78396 465 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 FKBP3Q00688 224 aaKnown RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 PLS1Q14651 629 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 HSP90AA5PQ58FG0 334 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 TNFAIP8L3Q5GJ75 292 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 GJC2Q5T442 439 aaPredicted RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 RASIP1Q5U651 963 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 ANKRD40Q6AI12 368 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 KLC3Q6P597 504 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 H2AFVQ71UI9 128 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 SV2BQ7L1I2 683 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 SLFN11Q7Z7L1 901 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 NELFCDQ8IXH7 590 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 ALDH16A1Q8IZ83 802 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 ANKRD35Q8N283 1001 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 ZNF513Q8N8E2 541 aaPredicted RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 PRSS33Q8NF86 280 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 OR2W6PQ8NHA6 318 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 NLRP7Q8WX94 980 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 STMN2Q93045 179 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 VTI1AQ96AJ9 217 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 ZNF653Q96CK0 615 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 MPHOSPH6Q99547 160 aaKnown RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 HINFPQ9BQA5 517 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 TANGO6Q9C0B7 1094 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 CARD9Q9H257 536 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 DHX36Q9H2U1 1008 aaKnown RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 MMADHCQ9H3L0 296 aaPredicted RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 AZI2Q9H6S1 392 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 UBN1Q9NPG3 1134 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 NLRC4Q9NPP4 1024 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 TYW1Q9NV66 732 aaKnown RBP7.96□□□□□ -1.14
TVP23C-208ENST00000581273 FAM86C1Q9NVL1 165 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 ZNF212Q9UDV6 495 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 DNAJB4Q9UDY4 337 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 PRKAG3Q9UGI9 489 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 AGAP1Q9UPQ3 857 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 MAPK8IP1Q9UQF2 711 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 ZNF148Q9UQR1 794 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 VPS9D1Q9Y2B5 631 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 USP20Q9Y2K6 914 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 STARD13Q9Y3M8 1113 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 IVNS1ABPQ9Y6Y0 642 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 FLT1P17948 1338 aa7.96□□□□□ -1.14
TVP23C-208ENST00000581273 PRRC2BQ5JSZ5 2229 aaKnown RBP7.95□□□□□ -1.14
TVP23C-208ENST00000581273 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.95□□□□□ -1.14
TVP23C-208ENST00000581273 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.95□□□□□ -1.14
TVP23C-208ENST00000581273 TLDC2A0PJX2 215 aa7.95□□□□□ -1.14
TVP23C-208ENST00000581273 ZSCAN5CA6NGD5 496 aaPredicted RBP7.95□□□□□ -1.14
TVP23C-208ENST00000581273 TCP11X1B4DZS4 312 aa7.95□□□□□ -1.14
TVP23C-208ENST00000581273 USP17L15C9J2P7 530 aa7.95□□□□□ -1.14
TVP23C-208ENST00000581273 USP17L13C9JLJ4 530 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms