RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 PDCD11Q14690 1871 aaKnown RBP14.39□□□□□ -0.11
NUP85-215ENST00000580879 XPOTO43592 962 aaKnown RBP14.38□□□□□ -0.11
NUP85-215ENST00000580879 LDHAP00338 332 aaKnown RBP14.38□□□□□ -0.11
NUP85-215ENST00000580879 SSTR3P32745 418 aaPredicted RBP14.38□□□□□ -0.11
NUP85-215ENST00000580879 CYP2J2P51589 502 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 CREMQ03060 361 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 ZP2Q05996 745 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 DPYDQ12882 1025 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 RSPO2Q6UXX9 243 aaPredicted RBP14.38□□□□□ -0.11
NUP85-215ENST00000580879 CBWD2Q8IUF1 395 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 GPR65Q8IYL9 337 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 FMR1NBQ8N0W7 255 aaPredicted RBP14.38□□□□□ -0.11
NUP85-215ENST00000580879 GPD1LQ8N335 351 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 SUSD6Q92537 303 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 CHMP5Q9NZZ3 219 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 DERAQ9Y315 318 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 TIMM13Q9Y5L4 95 aaPredicted RBP14.38□□□□□ -0.11
NUP85-215ENST00000580879 VWA8A3KMH1 1905 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 UBE4BO95155 1302 aa14.38□□□□□ -0.11
NUP85-215ENST00000580879 TNFRSF10AO00220 468 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 RFPL2O75678 378 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 IL18RAPO95256 599 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 MYL1P05976 194 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 SP100P23497 879 aaPredicted RBP14.37□□□□□ -0.11
NUP85-215ENST00000580879 OR1D2P34982 312 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 TFAMQ00059 246 aaKnown RBP14.37□□□□□ -0.11
NUP85-215ENST00000580879 CBX2Q14781 532 aaPredicted RBP14.37□□□□□ -0.11
NUP85-215ENST00000580879 KNOP1Q1ED39 458 aaKnown RBP14.37□□□□□ -0.11
NUP85-215ENST00000580879 BMT2Q1RMZ1 405 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 VARS2Q5ST30 1063 aaKnown RBP14.37□□□□□ -0.11
NUP85-215ENST00000580879 C9orf57Q5W0N0 161 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 LMBRD2Q68DH5 695 aaPredicted RBP14.37□□□□□ -0.11
NUP85-215ENST00000580879 HS2ST1Q7LGA3 356 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 ADHFE1Q8IWW8 467 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 RDH13Q8NBN7 331 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 SUSD3Q96L08 255 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 TSPAN18Q96SJ8 248 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 ADAM7Q9H2U9 754 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 SFXN1Q9H9B4 322 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 PDE11AQ9HCR9 933 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 DPP3Q9NY33 737 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 MTRRQ9UBK8 725 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 C2CD2Q9Y426 696 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 CDY1Q9Y6F8 540 aa14.37□□□□□ -0.11
NUP85-215ENST00000580879 ANK1P16157 1881 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 PLXNA3P51805 1871 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 SYN3O14994 580 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 SPTLC1O15269 473 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 GADD45BO75293 160 aaPredicted RBP14.36□□□□□ -0.11
NUP85-215ENST00000580879 ARPP19P56211 112 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 POU5F1Q01860 360 aaKnown RBP14.36□□□□□ -0.11
NUP85-215ENST00000580879 FAM160A1Q05DH4 1040 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 ITIH3Q06033 890 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 PSMD2Q13200 908 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 PNOCQ13519 176 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 SNW1Q13573 536 aaKnown RBP14.36□□□□□ -0.11
NUP85-215ENST00000580879 SCARA3Q6AZY7 606 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 CES5AQ6NT32 575 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 PDXDC1Q6P996 788 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 LILRA6Q6PI73 481 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 DSTYKQ6XUX3 929 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 ANKS3Q6ZW76 656 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 GJD3Q8N144 294 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 KREMEN2Q8NCW0 462 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 ENGASEQ8NFI3 743 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 ERCC4Q92889 916 aaPredicted RBP14.36□□□□□ -0.11
NUP85-215ENST00000580879 RPGRIP1Q96KN7 1286 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 PCDHB8Q9UN66 801 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 MAPK8IP1Q9UQF2 711 aa14.36□□□□□ -0.11
NUP85-215ENST00000580879 ANO9A1A5B4 782 aa14.35□□□□□ -0.11
NUP85-215ENST00000580879 ZNF233A6NK53 670 aa14.35□□□□□ -0.11
NUP85-215ENST00000580879 PIRO00625 290 aa14.35□□□□□ -0.11
NUP85-215ENST00000580879 KIAA0391O15091 583 aaKnown RBP14.35□□□□□ -0.11
NUP85-215ENST00000580879 CCDC47Q96A33 483 aaKnown RBP14.35□□□□□ -0.11
NUP85-215ENST00000580879 PHF7Q9BWX1 381 aaPredicted RBP14.35□□□□□ -0.11
NUP85-215ENST00000580879 POMKQ9H5K3 350 aa14.35□□□□□ -0.11
NUP85-215ENST00000580879 PRKAG3Q9UGI9 489 aa14.35□□□□□ -0.11
NUP85-215ENST00000580879 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.35□□□□□ -0.11
NUP85-215ENST00000580879 BACE2Q9Y5Z0 518 aa14.35□□□□□ -0.11
NUP85-215ENST00000580879 PTPRJQ12913 1337 aa14.35□□□□□ -0.11
NUP85-215ENST00000580879 CCDC195A0A1B0GUA6 201 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 M0QZQ0 153 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 RHOBTB3O94955 611 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 ITGB3P05106 788 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 POLR2BP30876 1174 aaKnown RBP14.34□□□□□ -0.11
NUP85-215ENST00000580879 AARSP49588 968 aaKnown RBP eCLIP14.34□□□□□ -0.11
NUP85-215ENST00000580879 LILRA4P59901 499 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 RAB33AQ14088 237 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 MRPL58Q14197 206 aaKnown RBP14.34□□□□□ -0.11
NUP85-215ENST00000580879 SNRNP35Q16560 246 aaKnown RBP14.34□□□□□ -0.11
NUP85-215ENST00000580879 CTXN3Q4LDR2 81 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 ATAT1Q5SQI0 421 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 GPR149Q86SP6 731 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 SMYD4Q8IYR2 804 aaPredicted RBP14.34□□□□□ -0.11
NUP85-215ENST00000580879 C1orf127Q8N9H9 656 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 XXYLT1Q8NBI6 393 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 APPL2Q8NEU8 664 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 OR5B17Q8NGF7 314 aa14.34□□□□□ -0.11
NUP85-215ENST00000580879 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
NUP85-215ENST00000580879 SENP8Q96LD8 212 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms