RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 CACNA2D4Q7Z3S7 1137 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 C4orf19Q8IY42 314 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 ELMOD1Q8N336 334 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 KDF1Q8NAX2 398 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-210ENST00000580713 ASAP3Q8TDY4 903 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 SMARCD2Q92925 531 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 LOXL4Q96JB6 756 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 LXNQ9BS40 222 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 RGL1Q9NZL6 768 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 CHMP5Q9NZZ3 219 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 KIF3AQ9Y496 699 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 SLC38A8A6NNN8 435 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 PTGESO14684 152 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 ZBTB39O15060 712 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 DTNBO60941 627 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 B3GAT3O94766 335 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 EPN2O95208 641 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 PAPSS2O95340 614 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-210ENST00000580713 CCDC192P0DO97 292 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 MYL4P12829 197 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 IFNAR1P17181 557 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 FGFR3P22607 806 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 TKTP29401 623 aaKnown RBP11.82□□□□□ -0.52
TOP3A-210ENST00000580713 SOX9P48436 509 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 POU5F1BQ06416 359 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 SSRP1Q08945 709 aaKnown RBP11.82□□□□□ -0.52
TOP3A-210ENST00000580713 PPP2R5CQ13362 524 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 CTTNQ14247 550 aaKnown RBP11.82□□□□□ -0.52
TOP3A-210ENST00000580713 PRSS36Q5K4E3 855 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 DGKKQ5KSL6 1271 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 NCAPH2Q6IBW4 605 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 IQCEQ6IPM2 695 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 ANKS3Q6ZW76 656 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 KBTBD6Q86V97 674 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 FAM184AQ8NB25 1140 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 DYDC2Q96IM9 177 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 ZSWIM3Q96MP5 696 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 CCDC43Q96MW1 224 aaKnown RBP11.82□□□□□ -0.52
TOP3A-210ENST00000580713 SLITRK6Q9H5Y7 841 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 C8orf33Q9H7E9 229 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-210ENST00000580713 CYP4F11Q9HBI6 524 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 XPNPEP1Q9NQW7 623 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 SNTG2Q9NY99 539 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 LHX6Q9UPM6 363 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 BACE2Q9Y5Z0 518 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 STK36Q9NRP7 1315 aa11.82□□□□□ -0.52
TOP3A-210ENST00000580713 IGF2RP11717 2491 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 A0A1B0GUA9 196 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 ARHGEF37A1IGU5 675 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 TMEM8BA6NDV4 472 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 HEPACAM2A8MVW5 462 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 I3L4J1 428 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 GIPC1O14908 333 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 TRAPPC3O43617 180 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 SLC37A4O43826 429 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 RPP40O75818 363 aaKnown RBP11.81□□□□□ -0.52
TOP3A-210ENST00000580713 RECQL4O94761 1208 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 GJA1P17302 382 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 PDCP20941 246 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 HOXC13P31276 330 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 CCR2P41597 374 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 PXNP49023 591 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-210ENST00000580713 NUCB2P80303 420 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 ROR1Q01973 937 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 CYP4A11Q02928 519 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 ZNF252P-AS1Q0IIN9 211 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 EPHA7Q15375 998 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 C1orf228Q6PIY5 440 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 MOXD1Q6UVY6 613 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 LRSAM1Q6UWE0 723 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 MFSD6LQ8IWD5 586 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 TPH2Q8IWU9 490 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 TRIM22Q8IYM9 498 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 ZNF461Q8TAF7 563 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 TTC8Q8TAM2 541 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 ZSCAN18Q8TBC5 510 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-210ENST00000580713 GAB3Q8WWW8 586 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 MSANTD3Q96H12 275 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 ZNF512Q96ME7 567 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-210ENST00000580713 FAM20AQ96MK3 541 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 RNF26Q9BY78 433 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-210ENST00000580713 ZSWIM4Q9H7M6 989 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 SH3GLB2Q9NR46 395 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 C2orf42Q9NWW7 574 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 ORC3Q9UBD5 711 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-210ENST00000580713 VAV3Q9UKW4 847 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 PCDHA4Q9UN74 947 aa11.81□□□□□ -0.52
TOP3A-210ENST00000580713 GREB1Q4ZG55 1949 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 TICRRQ7Z2Z1 1910 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 LRRIQ4A6NIV6 560 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 SRRM3A6NNA2 597 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-210ENST00000580713 TBX3O15119 743 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 MICAL2O94851 1124 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 FDPSP14324 419 aaKnown RBP11.8□□□□□ -0.52
TOP3A-210ENST00000580713 IGFBP6P24592 240 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-210ENST00000580713 HOXA6P31267 233 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 MPLP40238 635 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 INF2Q27J81 1249 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 LARP1BQ659C4 914 aaKnown RBP11.8□□□□□ -0.52
TOP3A-210ENST00000580713 PPP4R3AQ6IN85 833 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms